bioinfo-biols / Flow2SpatialLinks
Flow2Spatial reconstructs spatial proteomics through transfer learning.
☆22Updated 3 months ago
Alternatives and similar repositories for Flow2Spatial
Users that are interested in Flow2Spatial are comparing it to the libraries listed below
Sorting:
- CeLEry: cell location recovery in single-cell RNA sequencing☆35Updated 6 months ago
- ☆50Updated 5 months ago
- The first computational tool that enables both unsupervised and supervised discovery of tissue spatial domains☆32Updated 4 months ago
- ☆50Updated 3 months ago
- An optimal transport-based algorithm for inferring cell trajectories of spatial transcriptomics.☆27Updated 5 months ago
- Reproducing the experiments of the DestVI paper☆19Updated 3 years ago
- Cell level integrated analysis of tissue histology and spatial transcriptomics☆19Updated 3 weeks ago
- StereoMM is a graph fusion model that can integrate gene expression, histological images, and spatial location. And the information inter…☆36Updated 3 months ago
- Python agent-based model tool for inference, visualization and analysis of cell-cell communication from single-cell data☆33Updated last month
- ☆24Updated 4 months ago
- ☆31Updated last month
- CellDrift: temporal perturbation effects for single cell data☆13Updated 2 years ago
- Enhancing spatial transcriptomics data by predicting the expression of unmeasured genes from a dissociated scRNA-seq data☆36Updated last year
- Deciphering driver regulators of cell fate decisions from single-cell RNA-seq data☆25Updated 10 months ago
- Hotspot cluster distance analysis in spatial transcriptomic data☆29Updated 6 months ago
- STRIDE (Spatial TRanscRIptomics DEconvolution by topic modelling) is a cell-type deconvolution tool for spatial transcriptomics by using …☆17Updated 3 years ago
- ☆17Updated last year
- MeDuSA is a fine-resolution cellular deconvolution method that leverages scRNA-seq data as a reference to estimate cell-state abundance i…☆44Updated 6 months ago
- ☆31Updated 6 months ago
- ☆22Updated 2 years ago
- Spatial direct messaging detected by bivariate Moran☆27Updated last month
- Deciphering cell-cell communication from spatially resolved transcriptomic data at single-cell resolution with subgraph-based attentional…☆26Updated 11 months ago
- Supervised cell type identification for scATAC-seq data☆13Updated 2 years ago
- Spatial Cellular Estimator for Tumors☆57Updated last week
- Code for spatial subclone paper☆13Updated 7 months ago
- scMEGA: Single-cell Multiomic Enhancer-based Gene regulAtory network inference☆40Updated 11 months ago
- Methods for visualization and analysis of spatially-resolved gene expression☆21Updated 2 weeks ago
- Publically accessible code for DIISCO method☆12Updated 10 months ago
- Spot pseudo-Imager on top of histology☆39Updated 5 months ago
- Perturbation-response Score (PS) analysis is a method to quantify diverse perturbation responses and discover novel biological insights i…☆15Updated last year