xiebb123456 / AutomaticCellTypeIdentificationLinks
☆21Updated 3 years ago
Alternatives and similar repositories for AutomaticCellTypeIdentification
Users that are interested in AutomaticCellTypeIdentification are comparing it to the libraries listed below
Sorting:
- A unified interface to spatial transcriptomics deconvolution tools☆41Updated last week
- An R shiny based tool used for single cell RNA-seq data visualization and analysis.☆33Updated 4 years ago
- scGSVA: Perform GSVA for single cell RNA seq☆62Updated 8 months ago
- ☆56Updated last year
- A manually curated database of literature-supported ligand-receptor interactions in human and mouse☆31Updated last year
- scWGCNA☆61Updated 2 years ago
- Aligning gene expression trajectories of single-cell reference and query systems☆69Updated 9 months ago
- Coarse-graining of large single-cell RNA-seq data into metacells☆85Updated last week
- cell type deconvolution for multi-condition bulk RNA-seq data☆27Updated 3 years ago
- ☆41Updated 4 years ago
- Gene group activity utility functions for Scanpy☆79Updated 6 months ago
- Multi-omics profiling of peripheral immune system response to SARS-CoV-2 infection☆40Updated 3 years ago
- 🐯 tigeR: Tumor Immunotherapy Gene Expression Data Analysis R package☆33Updated last month
- Public code repository for the Banovich Lab at the Translational Genomics Research Institute (TGen).☆46Updated last year
- Identify genes with spatial expression trends in single-cell gene expression data☆50Updated 7 years ago
- Bostongene cell deconvolution algorithm from RNAseq☆55Updated last year
- Analysis cell-type-specific functional gene network, with SCINET and HumanNetv3☆43Updated last month
- Repository for the building, sharing and editing of scRNAseq pipelines for the Lung Cell Atlas☆37Updated 4 years ago
- ☆54Updated 11 months ago
- ☆56Updated last year
- ☆68Updated last year
- Draw phylogenetic trees of tumor evolution☆80Updated last year
- Gene set enrichment analysis for single-cell RNAseq data☆28Updated 2 years ago
- Infer Copy Number Alterations and Clonality in (Single-Cell) RNA-Seq Data☆41Updated last year
- Robust identification of perturbed cell types in single-cell RNA-seq data☆31Updated 7 months ago
- ConsensusTME Gene Sets and R Script☆39Updated last year
- ☆63Updated 4 years ago
- Gene regulatory network containing signed transcription factor-target gene interactions☆84Updated last month
- ☆47Updated 6 months ago
- an integrative analysis tool for analysing large-scale single cell RNA-sequencing data☆33Updated last year