xiebb123456 / AutomaticCellTypeIdentificationLinks
☆19Updated 3 years ago
Alternatives and similar repositories for AutomaticCellTypeIdentification
Users that are interested in AutomaticCellTypeIdentification are comparing it to the libraries listed below
Sorting:
- Gene set enrichment analysis for single-cell RNAseq data☆30Updated 2 years ago
- An R shiny based tool used for single cell RNA-seq data visualization and analysis.☆34Updated 4 years ago
- Coarse-graining of large single-cell RNA-seq data into metacells☆90Updated last week
- an integrative analysis tool for analysing large-scale single cell RNA-sequencing data☆36Updated 2 years ago
- A unified interface to spatial transcriptomics deconvolution tools☆45Updated last month
- ☆41Updated 4 years ago
- ☆62Updated 2 years ago
- scWGCNA☆61Updated 3 years ago
- Multi-omics profiling of peripheral immune system response to SARS-CoV-2 infection☆41Updated 4 years ago
- ☆57Updated last year
- scGSVA: Perform GSVA for single cell RNA seq☆67Updated last year
- A manually curated database of literature-supported ligand-receptor interactions in human and mouse☆31Updated last year
- ☆32Updated 4 years ago
- Code repository for single cell RNA-seq☆39Updated 5 years ago
- Repository for the building, sharing and editing of scRNAseq pipelines for the Lung Cell Atlas☆39Updated 4 years ago
- Unified access to several second-generation deconvolution methods☆88Updated last week
- Gene regulatory network containing signed transcription factor-target gene interactions☆92Updated 7 months ago
- Tumour Heterogeneity and Intercellular Networks of Nasopharyngeal Carcinoma at Single Cell Resolution☆13Updated 2 years ago
- Public code repository for the Banovich Lab at the Translational Genomics Research Institute (TGen).☆47Updated last year
- ☆64Updated 6 years ago
- Infer Copy Number Alterations and Clonality in (Single-Cell) RNA-Seq Data☆45Updated last year
- ☆16Updated 3 years ago
- ☆22Updated 2 years ago
- Aligning gene expression trajectories of single-cell reference and query systems☆80Updated 4 months ago
- R package for robust clustering of single cell RNA sequencing data☆36Updated last year
- ☆80Updated last year
- Pan-Cancer Single Cell Classifier☆81Updated last year
- Draw phylogenetic trees of tumor evolution☆86Updated 2 years ago
- Gene group activity utility functions for Scanpy☆99Updated last year
- Implements *CellAnnotator (aka *CAT/starCAT), annotating scRNA-Seq with predefined gene expression programs☆91Updated 2 weeks ago