☆19Feb 23, 2022Updated 4 years ago
Alternatives and similar repositories for AutomaticCellTypeIdentification
Users that are interested in AutomaticCellTypeIdentification are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Functions to analyze copy number aberrations in single-cell data☆13Feb 3, 2025Updated last year
- Deconvolution of spatial transcriptomics at single-cell resolution☆22Mar 25, 2026Updated 3 months ago
- eVITTA: an easy Visualization and Inference Toolbox for Transcriptome Analysis☆12Mar 23, 2024Updated 2 years ago
- ☆13Apr 27, 2022Updated 4 years ago
- ☆17Mar 6, 2024Updated 2 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- A public clone of the HypoMap Figure & analysis repository.☆12Sep 26, 2022Updated 3 years ago
- Single-cell Iso Prep☆17Oct 28, 2023Updated 2 years ago
- SCSA: cell type annotation for single-cell RNA-seq data☆94Apr 11, 2023Updated 3 years ago
- ☆11Sep 22, 2021Updated 4 years ago
- The R package scCODE, a platform for data-specific DE gene detection for scRNA-seq data☆15Nov 9, 2023Updated 2 years ago
- ☆40Nov 17, 2022Updated 3 years ago
- ☆27Jun 5, 2025Updated last year
- Accompanying code for the tutorial: Annotating single cell transcriptomic maps using automated and manual methods☆99Mar 18, 2023Updated 3 years ago
- 🐯 tigeR: Tumor Immunotherapy Gene Expression Data Analysis R package☆55Jan 21, 2026Updated 6 months ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- ☆309Nov 10, 2024Updated last year
- ☆13Nov 21, 2019Updated 6 years ago
- <Bioinformatics> scCancer2: data-driven in-depth annotations of the tumor microenvironment at single-level resolution☆27Aug 27, 2025Updated 10 months ago
- This repository contains the source code for the tappAS application. See README for details.☆22Jun 23, 2026Updated 3 weeks ago
- Gain biological insights using LLM.☆15Jan 26, 2026Updated 5 months ago
- An efficient Variant-Caller to highlight low allele-frequency tumor mutations in a clinical practice☆11Jun 5, 2023Updated 3 years ago
- ☆19Oct 26, 2021Updated 4 years ago
- The benchmarking of spatial transcriptomics deconvolution methods☆34Feb 24, 2023Updated 3 years ago
- ☆36Jan 23, 2024Updated 2 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Gene set enrichment analysis for single-cell RNAseq data☆31Feb 17, 2023Updated 3 years ago
- ☆102May 4, 2026Updated 2 months ago
- single cell analysis of treatment naive and treated human PDAC☆25May 27, 2022Updated 4 years ago
- Tumour Heterogeneity and Intercellular Networks of Nasopharyngeal Carcinoma at Single Cell Resolution☆13Mar 1, 2023Updated 3 years ago
- The codes and files for the study of subsolid nodules (SSN).☆15Oct 13, 2020Updated 5 years ago
- Conveniently perform ASCAT copy-number analysis from Tumor-Normal or Tumor only BAM files in R☆12Dec 6, 2021Updated 4 years ago
- Pretty, simple, optionally interactive plots for bioinformatics analysis pipelines☆14Mar 1, 2023Updated 3 years ago
- STARTRAC(Single T-cell Analysis by Rna-seq and Tcr TRACking)☆124Apr 26, 2025Updated last year
- A package for automated processing of single cell RNA-seq data in cancer☆117Aug 27, 2025Updated 10 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Spatial transcriptome analysis in python☆25Jan 26, 2025Updated last year