Alternatives and similar repositories for Galeano-Nino-Bullman-Intratumoral-Microbiota_2022

Users that are interested in Galeano-Nino-Bullman-Intratumoral-Microbiota_2022 are comparing it to the libraries listed below

• HaojiaWu / plot1cell
  A R package for advanced single cell data viz
  ☆67Updated last year
• arc85 / celltalker
  Inference of cell-cell communication from single-cell RNAseq data
  ☆48Updated last month
• SGI-LungCancer / SingleCell
  Code repository for single cell RNA-seq
  ☆35Updated 4 years ago
• liulab-dfci / RIMA_pipeline
  ☆80Updated last year
• TheHumphreysLab / plot1cell
  ☆107Updated 2 months ago
• mathyslab7 / ROSMAP_snRNAseq_PFC
  ☆30Updated last year
• YutingPKU / SingleCell-Multiomics
  ☆67Updated 2 years ago
• guokai8 / scGSVA
  scGSVA: Perform GSVA for single cell RNA seq
  ☆60Updated 6 months ago
• MGI-tech-bioinformatics / DNBelab_C_Series_scRNA-analysis-software
  An open source and flexible pipeline to analyze DNBelab C Series single-cell RNA datasets.
  ☆31Updated 2 years ago
• haniffalab / scRNA-seq_analysis
  Single cell RNA-seq analysis bundle
  ☆34Updated 5 years ago
• youqiongye / CRC_scRNAseq
  ☆45Updated 3 years ago
• KChen-lab / METAFlux
  ☆65Updated 11 months ago
• Japrin / STARTRAC
  STARTRAC(Single T-cell Analysis by Rna-seq and Tcr TRACking)
  ☆104Updated last month
• ruppinlab / CSI-Microbes-identification
  Code for the identification step for CSI-Microbes
  ☆29Updated 6 months ago
• xmc811 / Scillus
  R Package for Single-Cell Dataset Processing and Visualization
  ☆62Updated 3 years ago
• Aleksobrad / single-cell-rcc-pipeline
  Data files and code for analysis of single-cell ccRCC data for the manuscript "Tumor-Specific Cell Populations in Clear Cell Renal Carcin…
  ☆49Updated 3 years ago
• scottzijiezhang / m6A-seq_analysis_workflow
  A pipeline to process m6A-seq data and down stream analysis.
  ☆45Updated 4 years ago
• kerseviciute / aPEAR
  Enrichment Networks for Pathway Enrichment Analysis
  ☆52Updated 2 years ago
• stjude / ROSE
  ROSE: RANK ORDERING OF SUPER-ENHANCERS
  ☆47Updated 9 months ago
• tgen / banovichlab
  Public code repository for the Banovich Lab at the Translational Genomics Research Institute (TGen).
  ☆45Updated last year
• Coolgenome / iTALK
  ☆61Updated 5 years ago
• Dragonlongzhilin / RenalTumor
  Single-cell multi-omics analysis reveals regulatory programs in clear cell renal cell carcinoma
  ☆77Updated 7 months ago
• rpolicastro / scProportionTest
  ☆64Updated last year
• naomihabiblab / BEYOND_DLPFC
  Cellular dynamics across aged human brains uncover a multicellular cascade leading to Alzheimer’s disease
  ☆56Updated 5 months ago
• Core-Bioinformatics / MASLD-NASH
  scripts associated with NAFLD-NASH project
  ☆20Updated last year
• chloelulu / scMayoMap
  ☆22Updated last year
• BostonGene / MFP
  Mollecular Functional Portraits
  ☆40Updated last year
• jcao89757 / SCINA
  SCINA: A Semi-Supervised Subtyping Algorithm of Single Cells and Bulk Samples
  ☆69Updated 3 years ago
• aliceygao / pan-Fibroblast
  ☆42Updated 9 months ago
• RegnerM2015 / scENDO_scOVAR_2020
  This repository holds the scripts used to analyze the data presented in "A multi-omic single-cell landscape of human gynecologic malignan…
  ☆45Updated last year