domain adaptation of spatial and single-cell transcriptome
☆28Sep 21, 2024Updated 2 years ago
Alternatives and similar repositories for CellDART
Users that are interested in CellDART are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Deconvoluting Spatial Transcriptomics Data through Graph-based Artificial Intelligence☆40Aug 11, 2022Updated 4 years ago
- spSeudoMap: cell type mapping of spatial transcriptomics using unmatched single-cell RNA-seq data☆13Sep 29, 2024Updated 2 years ago
- This is a repository of IAMSAM, an image-based ST analysis tool☆22Jun 24, 2025Updated last year
- CELLama Project☆23Jul 30, 2026Updated 3 months ago
- A Method for Mapping Single-cell and Spatial Transcriptomics Data with Transfer Learning☆13Nov 17, 2023Updated 2 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- ☆40Nov 17, 2022Updated 3 years ago
- UniCell Deconvolve Paper☆10Apr 25, 2023Updated 3 years ago
- capturing spatial colocalization and interaction in the TME using topological analysis in spatial transcriptomics data☆12May 14, 2025Updated last year
- spatially aware scalable and accurate tool for spot deconvolution and clustering in spatial transcriptomics☆14Aug 12, 2024Updated 2 years ago
- ☆12Aug 16, 2022Updated 4 years ago
- TACCO: Transfer of Annotations to Cells and their COmbinations☆70Apr 21, 2026Updated 6 months ago
- code and dataset for spatialDWLS☆14Apr 18, 2021Updated 5 years ago
- ☆20Feb 23, 2022Updated 4 years ago
- The benchmarking of spatial transcriptomics deconvolution methods☆35Feb 24, 2023Updated 3 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Spatial-eXpression-R: Cell type identification (including cell type mixtures) and cell type-specific differential expression for spatial …☆491Jan 22, 2026Updated 9 months ago
- UniCell Deconvolve - Cloud Cell Type Deconvolution For Transcriptomic Data☆28Jul 26, 2023Updated 3 years ago
- Spatial alignment of single cell transcriptomic data.☆375Jul 1, 2025Updated last year
- Flexible Integration of single-cell RNA-sequencing data for large-scale Multi-tissue cell atlas datasets☆13Sep 20, 2022Updated 4 years ago
- 将速铂下载工具进行封装,以便高效方便地批量下载SRA测序数据。☆11Sep 1, 2020Updated 6 years ago
- ☆17Oct 18, 2023Updated 3 years ago
- Cell-type Assignment and Module Extraction based on a heterogeneous graph neural network.☆10Oct 30, 2023Updated 3 years ago
- Identify spatial domain☆92May 29, 2025Updated last year
- ☆14Nov 12, 2025Updated 11 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Aligned Diffusion Schroedinger Bridges (UAI 2023)☆14Sep 18, 2025Updated last year
- ☆165Mar 19, 2024Updated 2 years ago
- This repository contains the scripts developed for the analysis of CRC samples processed with the 10x VISIUM Spatial Transcriptomics tech…☆12Feb 7, 2023Updated 3 years ago
- CellNeighborEX: Deciphering Neighbor-Dependent Gene Expression from Spatial Transcriptomics Data☆15Mar 13, 2026Updated 7 months ago
- ☆12Mar 22, 2023Updated 3 years ago
- data for spacejam2☆18Aug 3, 2022Updated 4 years ago
- Shiny app for geno-pheno catalog☆11Nov 4, 2022Updated 3 years ago
- Inferring allele-specific copy number aberrations and tumor phylogeography from spatially resolved transcriptomics☆52Aug 18, 2025Updated last year
- ☆139Jun 10, 2022Updated 4 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Cell type matching in single-cell RNA-sequencing data using FR-Match☆23Oct 8, 2026Updated 3 weeks ago
- The codes and files for the study of subsolid nodules (SSN).☆15Oct 13, 2020Updated 6 years ago
- R package expanding integrative analysis capabilities of Seurat by providing seamless access to popular integration methods and to an int…☆36Jul 23, 2026Updated 3 months ago
- A robust PCA method of tumor clone and evolution inference from single-cell sequencing data.☆12May 28, 2020Updated 6 years ago
- Spatial One☆32Oct 31, 2024Updated last year
- MACA: Marker-based automatic cell-type annotation for single cell expression data☆26Jul 12, 2023Updated 3 years ago
- Methods for visualization and analysis of spatially-resolved gene expression☆23Oct 16, 2026Updated 2 weeks ago