Alternatives and similar repositories for CellDART:

Users that are interested in CellDART are comparing it to the libraries listed below

• tabdelaal / SpaGE
  Enhancing spatial transcriptomics data by predicting the expression of unmeasured genes from a dissociated scRNA-seq data
  ☆33Updated 7 months ago
• TencentAILabHealthcare / spatialID
  ☆37Updated 2 years ago
• zhoux85 / STAligner
  STAligner is a tool for alignment and integration of spatially resolved transcriptomics data.
  ☆34Updated 10 months ago
• dpeerlab / ENVI
  ☆44Updated 4 months ago
• chenhcs / SCS
  Sub-cellular spatial transcriptomics Cell Segmentation
  ☆60Updated last year
• QuKunLab / SPACEL
  ☆52Updated 6 months ago
• tanlabcode / CytoCommunity
  The first computational tool that enables both unsupervised and supervised discovery of tissue spatial domains
  ☆26Updated 11 months ago
• Patchouli-M / SequencingCancerFinder
  ☆31Updated last year
• Su-informatics-lab / DSTG
  Deconvoluting Spatial Transcriptomics Data through Graph-based Artificial Intelligence
  ☆37Updated 2 years ago
• romain-lopez / DestVI-reproducibility
  Reproducing the experiments of the DestVI paper
  ☆17Updated 3 years ago
• YingMa0107 / IRIS
  Integrative and Reference-Informed Spatial Domain Detection for Spatial Transcriptomics
  ☆30Updated 2 weeks ago
• YangLabHKUST / Portal
  Adversarial domain translation networks for integrating large-scale atlas-level single-cell datasets
  ☆30Updated last year
• jianhuupenn / TESLA
  Deciphering tumor ecosystems at super-resolution from spatial transcriptomics with TESLA
  ☆52Updated 11 months ago
• leihouyeung / STdeconv_benchmark
  The benchmarking of spatial transcriptomics deconvolution methods
  ☆28Updated last year
• raphael-group / paste2
  Probabilistic Alignment of Spatial Transcriptomics Experiments v.2
  ☆34Updated last year
• hongleir / SpaceFlow
  ☆25Updated last year
• zhengli09 / BASS
  Bayesian Analytics for Spatial Segmentation
  ☆23Updated 4 months ago
• QihuangZhang / CeLEry
  CeLEry: cell location recovery in single-cell RNA sequencing
  ☆33Updated this week
• JiangBioLab / DeepTalk
  Deciphering cell-cell communication from spatially resolved transcriptomic data at single-cell resolution with subgraph-based attentional…
  ☆22Updated 5 months ago
• YangLabHKUST / SpatialScope
  A unified approach for integrating spatial and single-cell transcriptomics data by leveraging deep generative models
  ☆59Updated 8 months ago
• StatBiomed / SpatialDM
  Spatial direct messaging detected by bivariate Moran
  ☆25Updated last month
• XLearning-SCU / scBridge
  ☆18Updated 6 months ago
• bsungwoo / spSeudoMap
  spSeudoMap: cell type mapping of spatial transcriptomics using unmatched single-cell RNA-seq data
  ☆11Updated 4 months ago
• theislab / scArches-reproducibility
  Reproducing result from the paper
  ☆33Updated 3 years ago
• data2intelligence / SpaCET
  Spatial Cellular Estimator for Tumors
  ☆47Updated this week
• drieslab / awesome-spatial-data-analysis
  Awesome list of tools and methods to perform spatial transcriptomic data analysis.
  ☆39Updated 3 years ago
• Teichlab / drug2cell
  Gene group activity utility functions for Scanpy
  ☆67Updated last month
• JinmiaoChenLab / SpatialGlue
  SpatialGlue is a novel deep learning methods for spatial multi-omics data integration.
  ☆48Updated 7 months ago
• MICS-Lab / novae
  Graph-based foundation model for spatial transcriptomics data. Zero-shot spatial domain inference, batch-effect correction, and many othe…
  ☆30Updated this week