Axolotl Regenerative Telencehpalon Interpretation via Spatiotemporal Transcriptomic Atlas
☆21Jul 3, 2022Updated 4 years ago
Alternatives and similar repositories for ARTISTA
Users that are interested in ARTISTA are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Spatial transcriptome analysis in python☆25Jan 26, 2025Updated last year
- ☆27Jul 30, 2025Updated 11 months ago
- ☆40Nov 17, 2022Updated 3 years ago
- Code used to generate the results in "Somatic chronology of treatment-resistant prostate cancer via deep whole-genome ctDNA sequencing"☆17Mar 11, 2024Updated 2 years ago
- tutorials for spateo package☆21Dec 25, 2024Updated last year
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Enhancing spatial transcriptomics data by predicting the expression of unmeasured genes from a dissociated scRNA-seq data☆43Jul 1, 2024Updated 2 years ago
- Spatial Single Cell transcriptomic library☆22Jan 15, 2026Updated 6 months ago
- An open source and flexible pipeline to analyze DNBelab C Series single-cell RNA datasets.☆40Nov 24, 2022Updated 3 years ago
- general repo that holds all analysis and figures for the thymus spatial atlas by Yayon, Kedlian, Boehme, Radtke and many more!☆12Nov 20, 2024Updated last year
- CytoSPACE: Optimal mapping of scRNA-seq data to spatial transcriptomics data☆151Feb 20, 2025Updated last year
- ☆28Jun 4, 2023Updated 3 years ago
- Code repository for TCAT analyses☆15Sep 26, 2025Updated 9 months ago
- A single cell transcriptome atlas of the developing zebrafish hindbrain.☆14Jan 2, 2020Updated 6 years ago
- ☆162Mar 19, 2024Updated 2 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- STRIDE (Spatial TRanscRIptomics DEconvolution by topic modelling) is a cell-type deconvolution tool for spatial transcriptomics by using …☆28Jul 13, 2026Updated last week
- CellNeighborEX: Deciphering Neighbor-Dependent Gene Expression from Spatial Transcriptomics Data☆16Mar 13, 2026Updated 4 months ago
- Dynamic inference from single-cell snapshots by optimal transport☆21Mar 14, 2024Updated 2 years ago
- ☆63Jul 23, 2024Updated last year
- ☆10Jan 18, 2023Updated 3 years ago
- The scripts used for the analyses in TOME project☆25Nov 28, 2025Updated 7 months ago
- R package for decontaminating the spot swapping effect and recovering true expression in spatial transcriptomics data☆38Jan 13, 2026Updated 6 months ago
- ☆12Dec 4, 2023Updated 2 years ago
- Porting of Protein Activity and Pathway Inference to single cell and Python.☆15Jun 12, 2026Updated last month
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- STAligner is a tool for alignment and integration of spatially resolved transcriptomics data.☆53Apr 8, 2024Updated 2 years ago
- ☆140Jun 25, 2026Updated 3 weeks ago
- A unified framework for identifying multicellular niches and niche-regulated cell states from spatial transcriptomics data.☆17May 15, 2026Updated 2 months ago
- ☆23Jul 15, 2025Updated last year
- ☆24Jul 9, 2025Updated last year
- A toolkit of spatial transcriptomic analysis.☆289Updated this week
- ☆12Jan 31, 2023Updated 3 years ago
- ☆15Aug 21, 2025Updated 10 months ago
- Human Muscle Ageing Cell Atlas☆21Mar 8, 2024Updated 2 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Codes used in LISTA project.☆15Apr 17, 2024Updated 2 years ago
- Spatial RNA velocity☆10Oct 3, 2024Updated last year
- The Tomographer package implements the mathematical spatial image reconstruction of any set of read counts as described in the following …☆11May 15, 2021Updated 5 years ago
- Spatial Cellular Estimator for Tumors☆65Updated this week
- ☆23Oct 30, 2022Updated 3 years ago
- Method used in the study on germline mutation rate estimation in 68 species of vertebrates.☆17Oct 11, 2021Updated 4 years ago
- TRUST4 manuscript evaluation☆17Jul 8, 2022Updated 4 years ago