Teichlab / scg_lib_structsLinks
Collections of library structure and sequence of popular single cell genomic methods
☆485Updated 5 months ago
Alternatives and similar repositories for scg_lib_structs
Users that are interested in scg_lib_structs are comparing it to the libraries listed below
Sorting:
- ENCODE ATAC-seq pipeline☆434Updated last year
- 10x Genomics Single Cell Analysis☆437Updated 9 months ago
- Intro to ChIPseq using HPC☆316Updated 2 years ago
- Analysis Pipeline for Single Cell ATAC-seq☆320Updated 2 years ago
- ArchR : Analysis of Regulatory Chromatin in R (www.ArchRProject.com)☆436Updated 8 months ago
- zUMIs: A fast and flexible pipeline to process RNA sequencing data with UMIs☆286Updated last year
- Application for making ENCODE Blacklists☆327Updated 4 years ago
- ☆401Updated 3 years ago
- Tools for handling Unique Molecular Identifiers in NGS data sets☆528Updated 4 months ago
- TCR and BCR assembly from RNA-seq data☆330Updated this week
- ENCODE ChIP-seq pipeline☆275Updated last year
- A collection of tools for Hi-C data analysis☆620Updated last week
- Inferring CNV from Single-Cell RNA-Seq☆646Updated 9 months ago
- RNA-seq workflow using STAR and DESeq2☆346Updated 2 months ago
- Table of software for the analysis of single-cell RNA-seq data.☆331Updated last week
- R package for detecting doublets in single-cell RNA sequencing data☆504Updated 7 months ago
- RNA Velocity generalized through dynamical modeling☆471Updated this week
- GTEx & TOPMed data production and analysis pipelines☆386Updated 2 months ago
- HiC-Pro: An optimized and flexible pipeline for Hi-C data processing☆426Updated last year
- CellBender is a software package for eliminating technical artifacts from high-throughput single-cell RNA sequencing (scRNA-seq) data.☆365Updated 3 months ago
- Transcription factor Occupancy prediction By Investigation of ATAC-seq Signal☆230Updated 2 months ago
- MiXCR is an ultimate software platform for analysis of Next-Generation Sequencing (NGS) data for immune profiling.☆377Updated this week
- Differential expression of RNA-seq data using the Negative Binomial☆418Updated last week
- A tool to find sequencing data and metadata from public databases.☆592Updated last year
- Analysis of single cell RNA-seq data course☆158Updated 3 years ago
- ☆633Updated 7 months ago
- ☆442Updated 5 years ago
- ☆360Updated 3 years ago
- ☆209Updated 3 months ago
- NicheNet: predict active ligand-target links between interacting cells☆589Updated this week