Svvord / iMAPLinks
A novel unsupervised batch removal framework, called iMAP, based on neural networks.
☆35Updated 3 years ago
Alternatives and similar repositories for iMAP
Users that are interested in iMAP are comparing it to the libraries listed below
Sorting:
- Code repository for the Tumor Immune Cell Atlas (TICA) project☆64Updated 3 years ago
- Identify genes with spatial expression trends in single-cell gene expression data☆50Updated 7 years ago
- Unified access to several second-generation deconvolution methods☆88Updated 2 weeks ago
- ☆80Updated last year
- Draw phylogenetic trees of tumor evolution☆86Updated 2 years ago
- ☆63Updated 5 years ago
- ☆64Updated 6 years ago
- ☆62Updated 2 years ago
- Code repository for single cell RNA-seq☆39Updated 5 years ago
- Gene signature extraction and cell-identity recognition at individual cell level from single-cell RNA-seq.☆95Updated 2 years ago
- A portable and fast single cell type identifier☆63Updated 4 years ago
- Bostongene cell deconvolution algorithm from RNAseq☆60Updated last year
- Methods to compute Local Inverse Simpson's Index (LISI)☆72Updated 4 years ago
- Public code repository for the Banovich Lab at the Translational Genomics Research Institute (TGen).☆47Updated last year
- A unified interface to spatial transcriptomics deconvolution tools☆45Updated last month
- Gene regulatory network containing signed transcription factor-target gene interactions☆93Updated 7 months ago
- Tumor Immune Single-cell Hub☆21Updated 5 years ago
- ☆33Updated 4 years ago
- Multi-omics profiling of peripheral immune system response to SARS-CoV-2 infection☆41Updated 4 years ago
- Coarse-graining of large single-cell RNA-seq data into metacells☆90Updated 2 weeks ago
- Pipeline for exploring metebolic heterogeneity at single-cell resolution☆74Updated 5 years ago
- Gene set enrichment analysis for single-cell RNAseq data☆30Updated 2 years ago
- Repository for Cibersortx☆61Updated 4 years ago
- A manually curated database of literature-supported ligand-receptor interactions in human and mouse☆31Updated last year
- Inference of cell-cell communication from single-cell RNAseq data☆48Updated 8 months ago
- ☆41Updated 4 years ago
- A R package for integrated scRNA-seq data analysis using the RPCI algorithm☆44Updated last year
- ☆61Updated 4 years ago
- Accurate and fast cell marker gene identification with COSG☆62Updated 3 years ago
- ☆57Updated last year