A hierarchical deep learning framework for ncRNA-protein interaction prediction.
☆14Nov 25, 2022Updated 3 years ago
Alternatives and similar repositories for RPITER
Users that are interested in RPITER are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- The ChIP-Seq peak calling algorithm using convolution neural networks☆15Jan 18, 2021Updated 5 years ago
- The source codes for our paper submitted to Neurocomputing in 2017. We propose a linear label propagation method (LPLNP method) to predic…☆18Jun 5, 2017Updated 9 years ago
- ☆21Jun 22, 2022Updated 4 years ago
- ☆10Feb 14, 2022Updated 4 years ago
- Predicting dynamic cellular protein-RNA interactions using deep learning and in vivo RNA structure☆70Mar 3, 2024Updated 2 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- R packages☆13Updated this week
- LncADeep is an ab initio lncRNA identification and functional annotation tool based on deep learning☆29Jun 4, 2018Updated 8 years ago
- 程考资料(C++)☆11Jan 16, 2019Updated 7 years ago
- ☆35Nov 7, 2022Updated 3 years ago
- Scripts and datasets to reproduce the experiment of the paper "Exploring non-coding RNA functions with deep learning tools"☆16Mar 24, 2021Updated 5 years ago
- ☆13Mar 15, 2022Updated 4 years ago
- RNA 3D structure prediction using multiple sequence alignment information docs @ http://EvoClustRNA.rtfd.io☆14Nov 3, 2022Updated 3 years ago
- Predicting lncRNA-disease associations in heterogeneous network based on deep learning method.☆13May 11, 2020Updated 6 years ago
- ☆16Apr 9, 2021Updated 5 years ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- Variational Estimation of Latent Velocity from Expression with Time-resolution☆13May 30, 2024Updated 2 years ago
- Trainable representation analysis study repository☆44Apr 5, 2022Updated 4 years ago
- A comprehensive collection of long inverted repeats in 424 eukaryotic genomes☆16Nov 4, 2021Updated 4 years ago
- Minimum plain text representation of kmer sets☆20Jan 30, 2025Updated last year
- Course materials for Math 241 at Reed College.☆11May 11, 2018Updated 8 years ago
- The snakemake workflow for whole-exome sequencing analysis and generating vcf files☆11Dec 17, 2022Updated 3 years ago
- Code for the paper "A comprehensive examination of Nanopore native RNA sequencing for characterization of complex transcriptomes"☆20Oct 29, 2019Updated 7 years ago
- An automatic web tool for phylogenetic inference of animal/palnt orthogroups under purposeful taxonomic sampling☆10Oct 21, 2026Updated last week
- ☆14Jun 17, 2023Updated 3 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Python Scripts for Bioinformatics☆15Apr 24, 2024Updated 2 years ago
- scripts for the integrating ATAC-seq, RNA-seq and CHi-C paper☆26Nov 17, 2022Updated 3 years ago
- ☆32Oct 3, 2023Updated 3 years ago
- Multilayer recursive feature elimination based on embedded genetic algorithm for cancer classification☆15Nov 25, 2018Updated 7 years ago
- epigenome analysis to rank transcription factors☆15Dec 19, 2019Updated 6 years ago
- This is small practice to location and detect the fog exponent.☆13May 9, 2021Updated 5 years ago
- Visualize the inner workings of RNA bioinformatics algorithms for structure prediction, interaction prediction and sequence alignment.☆40Feb 28, 2024Updated 2 years ago
- Use LSTM neural network for 1D distributional data prediction☆22Sep 29, 2022Updated 4 years ago
- An interpretable machine learning algorithm to predict disordered protein phase separation based on biophysical interactions☆14Apr 10, 2026Updated 6 months ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Alternative Splicing ToolKit☆10Oct 29, 2025Updated last year
- Docking benchmark 5 - cleaned and ready to use for HADDOCK☆14Updated this week
- Ontology for phenotypes pertaining to the nematode Caenorhabditis elegans and related nematodes used by the nematode genome database Worm…☆11Apr 16, 2026Updated 6 months ago
- Modelling RBP binding preferences to predict RPB binding sites☆11Mar 4, 2021Updated 5 years ago
- FASTAptamer: A Bioinformatic Toolkit for High-Throughput Sequence Analysis of Combinatorial Selections☆11Oct 7, 2024Updated 2 years ago
- Convert DeepBind models to Keras☆12Jul 15, 2018Updated 8 years ago
- assemble, annotate, and assess transcriptomes in a single step☆10Mar 16, 2017Updated 9 years ago