Alternatives and similar repositories for QLattice-clinical-omics:

Users that are interested in QLattice-clinical-omics are comparing it to the libraries listed below

• bsml320 / VAEN
  A deep generative neural network based approach to impute drug response
  ☆18Updated 3 years ago
• johli / scrambler
  Interpretation by Deep Generative Masking for Biological Sequences
  ☆37Updated 3 years ago
• zuozhaorui / SWnet
  Core code for the paper "A deep learning model for drug response prediction from cancer genomic signatures and compound chemical structur…
  ☆20Updated 3 years ago
• FunctionLab / tapioca
  a framework for predicting global protein-protein interaction networks from dynamic mass spec data
  ☆23Updated 10 months ago
• evanseitz / squid-nn
  surrogate quantitative interpretability for deepnets
  ☆20Updated 7 months ago
• epigen / KPNN
  Knowledge-primed neural networks
  ☆35Updated last year
• HantaoShu / DeepSEM
  ☆73Updated last year
• hui2000ji / scETM
  A generative topic model that facilitates integrative analysis of large-scale single-cell RNA sequencing data.
  ☆49Updated 3 years ago
• sunyolo / DeepTFni
  A VGAE-based model to infer transcription factor regulatory network
  ☆25Updated 2 years ago
• XinmingTu / Awesome-Bio-ML-PKU
  This is a repo that includes some resources about machine learning and the application in biology. We are students/alumni of Peking Unive…
  ☆14Updated 5 years ago
• zj-zhang / AMBER
  Automated Modelling for Biological Evidence-based Research
  ☆44Updated last year
• TuftsBCB / RegDiffusion
  Diffusion model for gene regulatory network inference.
  ☆16Updated 8 months ago
• mims-harvard / PINNACLE
  Contextual AI models for single-cell protein biology
  ☆79Updated 4 months ago
• welch-lab / PerturbNet
  PerturbNet is a deep generative model that can predict the distribution of cell states induced by chemical or genetic perturbation
  ☆29Updated 2 months ago
• TencentAILabHealthcare / DeepAIR
  ☆33Updated last year
• chenhcs / FRoGS
  Functional Embedding of Gene Signatures
  ☆39Updated 11 months ago
• crazyhottommy / Machine_learning_drug_discovery
  ☆24Updated 2 months ago
• HelloWorldLTY / scEval
  Codes for paper: Evaluating the Utilities of Large Language Models in Single-cell Data Analysis.
  ☆62Updated 2 weeks ago
• krishnanlab / obnb
  A Python toolkit for setting up benchmarking dataset using biomedical networks
  ☆21Updated this week
• bowang-lab / BIONIC
  Biological Network Integration using Convolutions
  ☆60Updated last year
• melobio / Concerto-reproducibility
  ☆36Updated 2 years ago
• jianlin-cheng / DeepGRN
  Deep learning for modeling gene regulatory network
  ☆22Updated 3 years ago
• Superzchen / iFeatureOmega-CLI
  iFeatureOmega is a comprehensive platform for generating, analyzing and visualizing more than 170 representations for biological sequence…
  ☆29Updated last year
• Genentech / iterative-perturb-seq
  Sequential Optimal Experimental Design of Perturbation Screens Guided by Multimodal Priors
  ☆36Updated 8 months ago
• sjgosai / boda2
  Computational Optimization of DNA Activity (CODA)
  ☆53Updated 3 weeks ago
• menchelab / MultiOme
  Network-based project to explore gene connectivity through biological scales
  ☆23Updated 3 months ago
• krishnanlab / GenePlexus
  Data, results, and code accompanying the manuscript: "Supervised learning is an accurate method for network-based gene classification"
  ☆10Updated 3 years ago
• mims-harvard / SPECTRA
  SPECTRA: Spectral framework for evaluation of biomedical AI models
  ☆37Updated this week
• PayamDiba / SERGIO
  A simulator for single-cell expression data guided by gene regulatory networks
  ☆57Updated 8 months ago
• sanderlab / CellBox
  CellBox: Interpretable Machine Learning for Perturbation Biology
  ☆54Updated last year