Alternatives and similar repositories for sequence_cnn_models

Users that are interested in sequence_cnn_models are comparing it to the libraries listed below

• KrishnaswamyLab / Gene-Signal-Pattern-Analysis
  Learning meaningful representations of genes
  ☆19Updated 2 months ago
• kaizhang / single-cell-benchmark
  ☆10Updated 2 years ago
• liu-bioinfo-lab / EPCOT
  ☆24Updated last year
• ML4BM-Lab / ELATUS
  ☆13Updated 6 months ago
• theislab / mubind
  Learning motif contributions to cell transitions using sequence features and graphs.
  ☆28Updated last year
• jiang-q19 / scPRAM
  scPRAM accurately predicts single-cell gene expression perturbation response based on attention mechanism
  ☆15Updated 11 months ago
• ejarmand / comparative_epigenomic_motor_cortex
  ☆10Updated 9 months ago
• rs239 / velorama
  Gene regulatory network inference for RNA velocity and pseudotime data
  ☆27Updated 3 weeks ago
• shtoneyan / gopher
  Toolset for training quantitative sequence to function models.
  ☆23Updated last year
• chenhcs / GIANT
  GIANT (Gene-based data Integration and ANalysis Technique) is a method for large-scale joint analyses of atlas-level single cell data.
  ☆12Updated 2 years ago
• karbalayghareh / GraphReg
  Chromatin interaction aware gene regulatory modeling with graph attention networks
  ☆27Updated 2 years ago
• CostaLab / MOJITOO
  MOJITOO: a fast and universal method for integration of multimodal single cell data
  ☆11Updated 11 months ago
• mostafavilabuw / EnformerAssessment
  ☆24Updated last year
• azizilab / decipher
  A single-cell analysis toolkit to jointly analyze samples from distinct conditions
  ☆32Updated 6 months ago
• Teddy-XiongGZ / DeepGSEA
  ☆17Updated last year
• zakieh-tayyebi / CellSpace
  Scalable sequence-informed embedding of single-cell ATAC-seq data with CellSpace
  ☆41Updated 8 months ago
• mhorlacher / rbpnet
  ☆18Updated last year
• Genentech / pascient
  ☆17Updated 5 months ago
• rorymaizels / velvetVAE
  Variational Estimation of Latent Velocity from Expression with Time-resolution
  ☆11Updated last year
• jingshuw / SAVERX
  R package for transfer learning of single-cell RNA-seq denoising
  ☆30Updated 3 years ago
• zhyu-lab / bmvae
  a variational autoencoder method for clustering single-cell mutation data
  ☆12Updated last year
• ma-compbio / scGHOST
  single-cell Hi-C, scHi-C, Hi-C, 3D genome, nuclear organization, genome subcompartment
  ☆21Updated last year
• jishnu-lab / SLIDE
  ☆29Updated 3 months ago
• xiongxslab / Translatomer
  ☆24Updated 3 weeks ago
• Center-for-Health-Data-Science / multiDGD
  ☆26Updated 4 months ago
• cantinilab / scPRINT-old1
  Single Cell Pretrained Regulatory network INference from Transcripts
  ☆11Updated last year
• buenrostrolab / PRINT
  ☆19Updated 5 months ago
• Vivianstats / scINSIGHT
  Matrix factorization model for interpreting single cell gene expression in biologically heterogeneous data
  ☆22Updated last year
• yuanzhiyuan / SODB_analysis
  ☆12Updated 2 years ago
• hsmaan / Iniquitate
  Analysis of imbalanced data and its impacts in a scRNA-seq integration setting
  ☆30Updated 6 months ago