☆14Oct 14, 2022Updated 4 years ago
Alternatives and similar repositories for CaSee
Users that are interested in CaSee are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Single-cell analytic toolbox that offers modular workflows for multi-level cellular annotation and user-friendly analysis reports☆11Mar 31, 2026Updated 6 months ago
- Analysis and visualization of RNA-Seq results☆34Aug 25, 2026Updated last month
- gene regulatory network reconstruction from scRNA-Seq☆25Feb 10, 2022Updated 4 years ago
- DeepNovo workflow of neoantigen discovery by personalized de novo sequencing.☆12Nov 26, 2020Updated 5 years ago
- Workflow for Sequenza, cellularity and ploidy☆28Jun 11, 2026Updated 4 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- IRIS3: Integrated Cell-type-specific Regulon Inference Server from Single-cell RNA-Seq (https://bmbl.bmi.osumc.edu/iris3/)☆13Aug 26, 2026Updated last month
- The ECCsplorer is a bioinformatics pipeline for the automated detection of extrachromosomal circular DNA (eccDNA) from paired-end read da…☆21Apr 15, 2024Updated 2 years ago
- This is the repository which contains the code that was used to generate the results and figures of the “Single-cell RNA-sequencing revea…☆14Apr 14, 2026Updated 6 months ago
- Python pipeline and Javascript scatter plot library for single-cell datasets, http://cellbrowser.rtfd.org☆14Oct 9, 2026Updated last week
- analysis scripts related to Jin et al manuscript on scRNA seq in aging mouse brain☆26Jun 14, 2024Updated 2 years ago
- ☆16Apr 26, 2022Updated 4 years ago
- ☆12Feb 19, 2021Updated 5 years ago
- ☆15Dec 11, 2022Updated 3 years ago
- Scientific drawing☆12May 18, 2024Updated 2 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- A bioinformatics tool for SV detection and virus integration discovery☆21Sep 12, 2017Updated 9 years ago
- BingleSeq - A user-friendly R package for Bulk and Single-cell RNA-Seq data analyses☆25Jul 11, 2021Updated 5 years ago
- Bayesian model for RNA velocity estimation of periodic manifolds☆35Jun 25, 2024Updated 2 years ago
- ☆28Jan 25, 2022Updated 4 years ago
- ERGO is a deep learing based model for predicting TCR-peptide binding.☆18Aug 26, 2020Updated 6 years ago
- ☆17Mar 1, 2026Updated 7 months ago
- Notes on analysing RNAseq, focusing on alternative splicing & polyadenylation.☆12Nov 23, 2021Updated 4 years ago
- Mapping 3′UTR alternative polyadenylation quantitative trait loci through population-scale transcriptomic and genomic data☆18Mar 15, 2023Updated 3 years ago
- Filters for Next Generation Sequencing☆13Oct 31, 2024Updated last year
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Somatic coding and non-coding mutation enrichment analysis for tumor WGS data☆12Jun 16, 2021Updated 5 years ago
- ☆19Mar 31, 2024Updated 2 years ago
- ☆20Oct 17, 2024Updated 2 years ago
- a simple R data package for curated cancer pathway-specific gene lists☆14Mar 31, 2020Updated 6 years ago
- pipelines to process scRNA-seq data☆12Jan 11, 2021Updated 5 years ago
- a web-based R shiny application that wraps DESeq2 R package☆13Apr 19, 2020Updated 6 years ago
- Computational pipeline to process EasySci-RNA data.☆23Jan 17, 2024Updated 2 years ago
- cross-species analysis of cell identities, markers and regulations☆13Jul 11, 2025Updated last year
- COMUNET: a tool to explore and visualize intercellular communication☆13Apr 15, 2020Updated 6 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- ☆12Oct 31, 2020Updated 5 years ago
- ☆13Jun 7, 2024Updated 2 years ago
- ☆17Mar 11, 2023Updated 3 years ago
- Implementation of FACETS for Terra☆12Jan 20, 2023Updated 3 years ago
- ☆18May 10, 2023Updated 3 years ago
- ☆30Oct 6, 2021Updated 5 years ago
- An algorithm used to classify the cell types from single cell rna sequence data.☆10Jan 24, 2021Updated 5 years ago