choisy / cutoff
R package: determining cutoff values from bimodal data
☆10Updated 6 months ago
Related projects: ⓘ
- Automatic selection of number of principal components☆13Updated 2 years ago
- NOTE: This package has been renamed to sparrow and will be submitted to Bioconductor 3.14. Please use that package instead. This is kept …☆21Updated 3 years ago
- Core utilities for single-cell RNA-seq☆12Updated 6 months ago
- ☆12Updated 9 months ago
- Convert your single-cell/spatial analyses to parallel HPC/cloud workflows just using pipes in R☆12Updated 3 weeks ago
- Collection of analysis methods for small count data generated by rafalab members (the methods, not the data).☆19Updated 2 months ago
- R package for distinguishing cells from background barcodes in droplet-based single-cell RNA-seq data☆10Updated last year
- Benchmarking project for scalable clustering algorithms with large observations and HDF5 files☆8Updated 3 years ago
- Efficiently compute robust markers across single-cell datasets☆10Updated 3 years ago
- Code and results from TotalSeqC antibody titration and pipeline benchmarking for CITE-seq experiments☆9Updated 3 years ago
- Gene-level general linear mixed model☆18Updated last year
- R package to wrap cBioPortal's API to pull data from public or private cBioPortal databases☆19Updated 8 months ago
- hJAM is a hierarchical model which unifies the framework of Mendelian Randomization and Transcriptome-wide association studies.☆9Updated 8 months ago
- R package for detecting differential distributions using a statistical test based on the wasserstein distance☆25Updated last year
- scRNA-seq data visualization from scrattch☆24Updated 5 months ago
- Identify Intra-, Inter-donor variations in bulk or single cell longitudinal dataset☆16Updated last year
- Fast algorithms for GLM-PCA.☆10Updated 3 weeks ago
- cEll tyPe enrIChment☆14Updated last year
- Non-negative Independent Factor Analysis for single cell RNA-seq☆11Updated 2 years ago
- Code and data resources accompanying Urbut et al (2017), "Flexible statistical methods for estimating and testing effects in genomic stud…☆22Updated last year
- ☆14Updated last year
- ☆8Updated 2 years ago
- An R package for generating comparative regional association plots☆18Updated 4 years ago
- Bayesian model selection to detect zero-inflated genes☆8Updated 4 years ago
- A set of tools for accurate quantitation of single-cell allele-specific expression☆12Updated last year
- Instructions and analysis scripts for single cell Higher Order Testing (scHOT)☆9Updated 3 years ago
- ☆10Updated 5 years ago
- ☆11Updated 9 months ago
- BioCarta pathway images☆11Updated 11 months ago
- Archived version of RUVSeq☆8Updated 7 years ago