pblischak / polyploid-genotypingLinks
SNP genotyping in polyploids
☆17Updated 4 years ago
Alternatives and similar repositories for polyploid-genotyping
Users that are interested in polyploid-genotyping are comparing it to the libraries listed below
Sorting:
- ABLE - Approximate Blockwise Likelihood Estimation☆17Updated 6 years ago
- Minimal Assumption Genomic Inference of Coalescence☆14Updated last year
- ☆14Updated 2 years ago
- ☆11Updated 5 years ago
- Infer the age of ancestral nodes in a tree sequence.☆21Updated 2 weeks ago
- ☆13Updated last year
- Sampling and manipulating genome-wide ancestral recombination graphs (ARGs)☆13Updated 2 years ago
- ☆17Updated 9 years ago
- Kinship (genetic relatedness) using GBS (genotyping-by-sequencing) with Depth adjustment☆21Updated last month
- ☆20Updated 8 months ago
- Repository created to host the R package OneMap: software for constructing genetic maps in experimental crosses: full-sib, RILs, F2 and b…☆38Updated last year
- An R package to detect selection in biological pathways☆14Updated last year
- BayeScEnv is a Fst-based, genome-scan method that uses environmental variables to detect local adaptation.☆19Updated 7 years ago
- Distinguishing among modes of convergent adaptation using population genomic data: statistical inference method, extensions, and examples☆13Updated 6 years ago
- ☆11Updated 2 years ago
- Code and binaries related to processing haplotagging data☆15Updated 3 years ago
- The Vertebrate Genomes Project Mitogenome Assembly Pipeline☆18Updated 2 years ago
- Suite of tools for pangenomics built using vg☆23Updated 2 months ago
- ☆20Updated last year
- Module for analysing admixture graphs☆28Updated 7 years ago
- Performing highly efficient genome scans for local adaptation with R package pcadapt v4☆41Updated 9 months ago
- ☆13Updated last year
- ☆15Updated 5 years ago
- Genetic Map Comparison☆20Updated 2 years ago
- ☆30Updated 3 weeks ago
- Comprehensive, detailed and interactive plots for STRUCTURE and ADMIXTURE population analysis☆22Updated 7 months ago
- Genome-wide scan for balancing selection using beta statistic☆29Updated 2 years ago
- machine learning applications for dadi☆15Updated 5 months ago
- Automated and distributed population genetic model inference from allele frequency spectra☆16Updated 2 months ago
- Fitting latent factor mixed models☆13Updated 5 years ago