Automatised pipeline of ConsensuSV workflow.
☆24Aug 23, 2023Updated 2 years ago
Alternatives and similar repositories for ConsensuSV-pipeline
Users that are interested in ConsensuSV-pipeline are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆17Jul 19, 2024Updated last year
- Structural variant pipeline☆18Jun 25, 2020Updated 5 years ago
- HAT is a set of tools for calling de novo variants from whole-genome sequencing data.☆24Nov 18, 2025Updated 4 months ago
- ☆14Oct 17, 2024Updated last year
- Parakit is a tool to analyze the RCCX module, which contain the CYP21A2 gene, using long sequencing reads.☆14Aug 25, 2025Updated 7 months ago
- DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- An integrated computational framework for comprehensive transcriptome analyses with Nanopore direct-RNA sequencing data☆15May 17, 2025Updated 10 months ago
- A nextflow pipeline for analysing expression and splicing in RNA seq data from rare disease patient☆18Mar 2, 2026Updated 3 weeks ago
- A tool for visualizing alignments of reads in regions containing tandem repeats☆90Dec 19, 2023Updated 2 years ago
- Polygenic score calculation from VCF in Nim.☆15Nov 22, 2020Updated 5 years ago
- ☆27Mar 13, 2026Updated 2 weeks ago
- ☆15Apr 10, 2024Updated last year
- ☆13Jul 17, 2024Updated last year
- A Nextflow pipeline to align, merge, and organize large PhIP-Seq datasets☆12Feb 7, 2025Updated last year
- WDL workflows for variant calling and assembly using ONT☆39Mar 17, 2026Updated last week
- NordVPN Special Discount Offer • AdSave on top-rated NordVPN 1 or 2-year plans with secure browsing, privacy protection, and support for for all major platforms.
- ☆45Sep 10, 2024Updated last year
- DNAscan2 is a fast and efficient bioinformatics pipeline that allows for the analysis of DNA Next Generation sequencing data, requiring v…☆14May 7, 2024Updated last year
- scNOVA : Single-Cell Nucleosome Occupancy and genetic Variation Analysis☆11Jul 29, 2023Updated 2 years ago
- Jasmine: SV Merging Across Samples☆244Dec 20, 2024Updated last year
- ☆27Mar 1, 2026Updated 3 weeks ago
- Automated next generation DNA sequencing analysis pipeline suited for clinical tests, with >99.9% sensitivity to Sanger sequencing at rea…☆26Jan 21, 2020Updated 6 years ago
- blastn2dotplots: multiple dot-plot visualizer☆24Sep 15, 2025Updated 6 months ago
- vcfdist: Accurately benchmarking phased variant calls☆85Feb 23, 2026Updated last month
- Pangolin is a deep-learning method for predicting splice site strengths.☆85Jun 17, 2024Updated last year
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- De novo tandem repeat calling from PacBio HiFi data☆19Dec 5, 2025Updated 3 months ago
- ☆11Feb 4, 2026Updated last month
- A snakemake pipeline for 10X genomics cellranger☆22Oct 13, 2025Updated 5 months ago
- Accompanying analysis code for the FRASER manuscript☆25Aug 27, 2020Updated 5 years ago
- HybridCheck, an R package for quickly scripting scans of sequence data for recombination regions.☆15Jan 28, 2022Updated 4 years ago
- Script for removing or counting invariant sites for the RAxML ascertainment bias corrections☆16Oct 12, 2024Updated last year
- POSTRE: Prediction Of STRuctural variant Effects☆28Jan 9, 2026Updated 2 months ago
- ☆39Jul 3, 2025Updated 8 months ago
- Integrative analysis of complex structural variants☆22Sep 7, 2020Updated 5 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click and start building anything your business needs.
- ☆23Mar 20, 2024Updated 2 years ago
- R package to organise and standardise your genomic variant calls obtained with different callers.☆11Jul 15, 2019Updated 6 years ago
- ☆16Sep 1, 2023Updated 2 years ago
- Structural Variants Assessment Based on Haplotype-resolved Assemblies☆21Apr 28, 2023Updated 2 years ago
- Structural Variation breakpoint discovery via adaptive learning☆17Jul 6, 2023Updated 2 years ago
- Location of public benchmarking; primarily final results☆18Feb 17, 2025Updated last year
- overlapping bases in read-pairs from a fragment indicate accuracy and reveal error-prone sites☆34Jun 6, 2025Updated 9 months ago