healthdisparities / rye
Large scale ancestry inference from PCA data
☆21Updated last year
Alternatives and similar repositories for rye:
Users that are interested in rye are comparing it to the libraries listed below
- PopSTR - A Population based microsatellite genotyper☆32Updated last year
- Evaluation of phasing performance☆22Updated 7 years ago
- Structural variant (SV) analysis tools☆36Updated 9 months ago
- ☆13Updated last year
- Here we present a method to plot the outputs of RFMIX version 2☆23Updated 8 months ago
- Structural variant merging tool☆49Updated 8 months ago
- Immuological gene typing and annotation for genome assembly☆35Updated last month
- Code and custom scripts relevant to gnomAD-SV (Collins*, Brand*, et al., 2020)☆36Updated 4 years ago
- Single-cell/nuclei pipeline for data derived from Oxford Nanopore and 10X Genomics☆34Updated last week
- CADD-SV – a framework to score the effect of structural variants☆14Updated last month
- Liftover VCF files☆17Updated 8 years ago
- Suite of tools for analysing off-target reads to find CNVs, homozygous regions, and shared haplotypes☆29Updated 9 months ago
- ☆25Updated last year
- Fast and scalable variant annotation tool☆30Updated 2 years ago
- ☆17Updated 3 weeks ago
- Tools for merging Tandem Repeat VCF files☆29Updated 2 months ago
- Copy Number Methods for Detection and Genome Wide Association Tests☆22Updated 5 months ago
- Preprocessing sequencing data for allele-specific analysis☆11Updated last month
- Location of public benchmarking; primarily final results☆18Updated 2 months ago
- Sample Contamination Estimate from VCF☆19Updated 5 months ago
- ☆22Updated 4 months ago
- Structural Variant Prediction Viewer☆34Updated 7 years ago
- A nextflow pipeline for analysing expression and splicing in RNA seq data from rare disease patient☆13Updated this week
- Version II of Mandalorion☆32Updated 6 years ago
- A computational algorithm and software tool for fast and accurate detection of gene fusion by long-read transcriptome sequencing☆21Updated 3 years ago
- SAMStat displays various properties of next-generation sequencing reads stored in SAM/BAM format.☆24Updated last year
- Automated Detection and Qualification of Differential Methylation☆13Updated last year
- GWAS QC, PCA, haplotype phasing, genotype imputation☆18Updated last month
- Population-wide Deletion Calling☆35Updated last week
- A simple script to create a customizable html file from an AnnotSV output.☆18Updated 11 months ago