hwanglab / singlecell_tutorialLinks
single cell sequencing analysis tutorial
☆17Updated 6 years ago
Alternatives and similar repositories for singlecell_tutorial
Users that are interested in singlecell_tutorial are comparing it to the libraries listed below
Sorting:
- cell type deconvolution for multi-condition bulk RNA-seq data☆31Updated 3 years ago
- ☆33Updated 4 years ago
- ☆63Updated 2 years ago
- Code used to process the data of the HBCA project☆32Updated last year
- ☆39Updated 4 years ago
- Code for the manuscript "Single-cell analysis of human primary prostate cancer reveals the heterogeneity of tumor-associated epithelial c…☆25Updated 3 years ago
- ☆25Updated 3 years ago
- Immune Cell Gene Signatures for Profiling the Microenvironment of Solid Tumours☆28Updated 5 years ago
- Methods for clustering and analyzing high-throughput single cell immune cell repertoires (RepSeq)☆15Updated 7 months ago
- ☆37Updated 3 years ago
- ☆13Updated 3 weeks ago
- Collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using R.☆16Updated 4 years ago
- Repository containing all code for secondary analysis in the manuscript "On the design of CRISPR-based single cell molecular screens", Hi…☆26Updated 4 years ago
- MACA: Marker-based automatic cell-type annotation for single cell expression data☆25Updated 2 years ago
- Single-cell Case Control Analysis☆52Updated last week
- ☆12Updated 6 years ago
- GEfetch2R - Access Single-cell/Bulk RNA-seq Data from Public Repositories and Benchmark the Subsequent Format Conversion Tools☆39Updated last week
- fastCNV R package to detect putative CNVs in single cell and spatial transcriptomics data☆38Updated last week
- Analysis cell-type-specific functional gene network, with SCINET and HumanNetv3☆45Updated 5 months ago
- scWGCNA☆61Updated 3 years ago
- ☆48Updated last year
- scTyper: a comprehensive pipeline for the cell typing analysis of single-cell RNA-seq data☆32Updated 3 years ago
- ☆16Updated 4 years ago
- Functions for single cell data analysis☆32Updated 4 years ago
- Example of run CytoSig and reproduce prediction results on bulk and single-cell cohorts☆14Updated 2 years ago
- SIB/Scilifelab autumn school in single cell omics 2019.☆22Updated 6 years ago
- Cell age determination by scATAC-seq and bulk-ATAC-seq☆32Updated last week
- ☆19Updated last year
- ☆10Updated 8 months ago
- ☆18Updated 4 years ago