Single RNA-seq data analysis with R (Finland, May, 2019)
☆230Aug 1, 2022Updated 3 years ago
Alternatives and similar repositories for excelerate-scRNAseq
Users that are interested in excelerate-scRNAseq are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆607Mar 23, 2021Updated 5 years ago
- Analysis of single cell RNA-seq data course☆679Apr 11, 2022Updated 4 years ago
- Single cell current best practices tutorial case study for the paper:Luecken and Theis, "Current best practices in single-cell RNA-seq an…☆1,566Dec 11, 2022Updated 3 years ago
- A list of scRNA-seq analysis tools☆791Updated this week
- Automatic Annotation on Cell Types of Clusters from Single-Cell RNA Sequencing Data☆241May 8, 2023Updated 3 years ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- Code for evaluation of differential expression methods in single-cell RNA-seq data☆113Aug 13, 2020Updated 5 years ago
- Single cell RNA sequencing analysis course☆243Apr 27, 2026Updated 2 weeks ago
- scRNAseq analysis notes from Ming Tang☆804Dec 2, 2024Updated last year
- SingleR: Single-cell RNA-seq cell types Recognition (legacy version)☆337Jul 28, 2020Updated 5 years ago
- In this study, we perform systematic comparative analysis of seven widely-used SNV-calling methods, including SAMtools, the GATK Best Pra…☆16Oct 16, 2019Updated 6 years ago
- NicheNet: predict active ligand-target links between interacting cells☆642Nov 12, 2025Updated 6 months ago
- Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.☆3,732May 2, 2026Updated last week
- R package for integrating and analyzing multiple single-cell datasets☆429Feb 4, 2026Updated 3 months ago
- Single-cell analytic toolbox that offers modular workflows for multi-level cellular annotation and user-friendly analysis reports☆11Mar 31, 2026Updated last month
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- single cell and bulk RNASeq analysis scripts☆14Jan 13, 2022Updated 4 years ago
- Single-cell transcriptome profiling of an adult human cell atlas of 15 major organs☆39Jan 14, 2024Updated 2 years ago
- R toolkit for inference, visualization and analysis of cell-cell communication from single-cell data☆783Jan 6, 2024Updated 2 years ago
- Bench-marking classification tools for scRNA-seq data☆196Jun 9, 2022Updated 3 years ago
- The following repository contains code for all scRNAseq analysis and visualization performed in the paper: Single cell resolution analysi…☆18Oct 22, 2021Updated 4 years ago
- Publication Page for MPAL Paper 2019☆85Jun 25, 2020Updated 5 years ago
- Single cell RNA-seq analysis bundle☆37Sep 13, 2019Updated 6 years ago
- Comparison of single cell normalization strategies☆11Aug 13, 2021Updated 4 years ago
- R toolkit for single cell genomics☆2,721Updated this week
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Scripts for processing single liver cells RNA-Seq 10X Genomics Data☆27Oct 17, 2018Updated 7 years ago
- Single-Cell Sequencing Quality Control and Processing Software☆16Mar 26, 2022Updated 4 years ago
- R Data: Single cell RNA sequencing of human liver reveals distinct intrahepatic macrophage populations☆32May 12, 2020Updated 5 years ago
- Single-cell RNA-seq analysis from "Single cell transcriptomics reveals spatial and temporal dynamics of gene expression in the developing…☆27May 12, 2020Updated 5 years ago
- Supporting information of 'Single-cell RNA sequencing of a European and an African lymphoblastoid cell line'☆11Feb 27, 2020Updated 6 years ago
- ☆450May 5, 2026Updated last week
- R package for single-cell RNA-sequencing analysis☆16Sep 30, 2025Updated 7 months ago
- This is the repository that contains the analysis of the lung adenocarcinoma single cell dataset☆154Jan 6, 2021Updated 5 years ago
- This repo contains the code necessary to reproduce the clusters found in "The Immune Landscape of Cancer".☆18Aug 6, 2019Updated 6 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Fast, sensitive and accurate integration of single-cell data with Harmony☆648Updated this week
- Data and code for the paper "Developmental diversification of cortical inhibitory interneurons"☆24Dec 20, 2018Updated 7 years ago
- Publication Page for Satpathy*, Granja* et al 2019☆96Apr 29, 2020Updated 6 years ago
- Algorithm for the inference of cell types and lineage trees from single-cell RNA-seq data. Please download the R package from the RaceID3…☆15Dec 7, 2018Updated 7 years ago
- Cell types enrichment analysis☆210May 27, 2024Updated last year
- Single Cell Cluster Evaluation☆101Jul 28, 2021Updated 4 years ago
- R package for analyzing and interactively exploring large-scale single-cell RNA-seq datasets☆253Apr 1, 2026Updated last month