Single RNA-seq data analysis with R (Finland, May, 2019)
☆230Aug 1, 2022Updated 3 years ago
Alternatives and similar repositories for excelerate-scRNAseq
Users that are interested in excelerate-scRNAseq are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆606Mar 23, 2021Updated 5 years ago
- Analysis of single cell RNA-seq data course☆679Apr 11, 2022Updated 3 years ago
- Single cell current best practices tutorial case study for the paper:Luecken and Theis, "Current best practices in single-cell RNA-seq an…☆1,561Dec 11, 2022Updated 3 years ago
- A list of scRNA-seq analysis tools☆780Mar 9, 2026Updated 3 weeks ago
- Automatic Annotation on Cell Types of Clusters from Single-Cell RNA Sequencing Data☆238May 8, 2023Updated 2 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Code for evaluation of differential expression methods in single-cell RNA-seq data☆111Aug 13, 2020Updated 5 years ago
- Single cell RNA sequencing analysis course☆239Mar 23, 2026Updated last week
- scRNAseq analysis notes from Ming Tang☆789Dec 2, 2024Updated last year
- SingleR: Single-cell RNA-seq cell types Recognition (legacy version)☆333Jul 28, 2020Updated 5 years ago
- In this study, we perform systematic comparative analysis of seven widely-used SNV-calling methods, including SAMtools, the GATK Best Pra…☆16Oct 16, 2019Updated 6 years ago
- NicheNet: predict active ligand-target links between interacting cells☆630Nov 12, 2025Updated 4 months ago
- Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.☆3,683Mar 9, 2026Updated 3 weeks ago
- R package for integrating and analyzing multiple single-cell datasets☆427Feb 4, 2026Updated last month
- Single-cell analytic toolbox that offers modular workflows for multi-level cellular annotation and user-friendly analysis reports☆11May 25, 2023Updated 2 years ago
- NordVPN Threat Protection Pro™ • AdTake your cybersecurity to the next level. Block phishing, malware, trackers, and ads. Lightweight app that works with all browsers.
- single cell and bulk RNASeq analysis scripts☆14Jan 13, 2022Updated 4 years ago
- Single-cell transcriptome profiling of an adult human cell atlas of 15 major organs☆39Jan 14, 2024Updated 2 years ago
- R toolkit for inference, visualization and analysis of cell-cell communication from single-cell data☆775Jan 6, 2024Updated 2 years ago
- Bench-marking classification tools for scRNA-seq data☆195Jun 9, 2022Updated 3 years ago
- The following repository contains code for all scRNAseq analysis and visualization performed in the paper: Single cell resolution analysi…☆17Oct 22, 2021Updated 4 years ago
- Publication Page for MPAL Paper 2019☆84Jun 25, 2020Updated 5 years ago
- Single cell RNA-seq analysis bundle☆37Sep 13, 2019Updated 6 years ago
- Comparison of single cell normalization strategies☆10Aug 13, 2021Updated 4 years ago
- R toolkit for single cell genomics☆2,694Updated this week
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- R Data: Single cell RNA sequencing of human liver reveals distinct intrahepatic macrophage populations☆31May 12, 2020Updated 5 years ago
- Scripts for processing single liver cells RNA-Seq 10X Genomics Data☆26Oct 17, 2018Updated 7 years ago
- Single-Cell Sequencing Quality Control and Processing Software☆16Mar 26, 2022Updated 4 years ago
- Single-cell RNA-seq analysis from "Single cell transcriptomics reveals spatial and temporal dynamics of gene expression in the developing…☆26May 12, 2020Updated 5 years ago
- Supporting information of 'Single-cell RNA sequencing of a European and an African lymphoblastoid cell line'☆10Feb 27, 2020Updated 6 years ago
- ☆446Jan 8, 2026Updated 2 months ago
- R package for single-cell RNA-sequencing analysis☆15Sep 30, 2025Updated 6 months ago
- This is the repository that contains the analysis of the lung adenocarcinoma single cell dataset☆154Jan 6, 2021Updated 5 years ago
- This repo contains the code necessary to reproduce the clusters found in "The Immune Landscape of Cancer".☆18Aug 6, 2019Updated 6 years ago
- Wordpress hosting with auto-scaling on Cloudways • AdFully Managed hosting built for WordPress-powered businesses that need reliable, auto-scalable hosting. Cloudways SafeUpdates now available.
- Data and code for the paper "Developmental diversification of cortical inhibitory interneurons"☆24Dec 20, 2018Updated 7 years ago
- Fast, sensitive and accurate integration of single-cell data with Harmony☆631Mar 23, 2026Updated last week
- Publication Page for Satpathy*, Granja* et al 2019☆95Apr 29, 2020Updated 5 years ago
- R package for analyzing and interactively exploring large-scale single-cell RNA-seq datasets☆246Mar 8, 2026Updated 3 weeks ago
- Algorithm for the inference of cell types and lineage trees from single-cell RNA-seq data. Please download the R package from the RaceID3…☆15Dec 7, 2018Updated 7 years ago
- Cell types enrichment analysis☆210May 27, 2024Updated last year
- Single Cell Cluster Evaluation☆100Jul 28, 2021Updated 4 years ago