Alternatives and similar repositories for workshop_omics_integration

Users that are interested in workshop_omics_integration are comparing it to the libraries listed below

• crazyhottommy / compbio_tutorials
  My youtube programming scripts
  ☆58Updated 8 months ago
• crazyhottommy / machine-learning-resource
  ☆83Updated 10 months ago
• crazyhottommy / papers_with_data_to_mine
  published papers with a lot of data
  ☆74Updated 6 months ago
• tidyomics / tidyomics
  Easily install and load packages from the tidyomcis ecosystem
  ☆68Updated last year
• AlexsLemonade / training-modules
  A collection of modules that are combined into 1-5 day workshops on computational topics for the childhood cancer research community.
  ☆70Updated 2 months ago
• YuLab-SMU / biomedical-knowledge-mining-book
  Biomedical knowledge mining using GOSemSim and clusterProfiler
  ☆80Updated 2 years ago
• federicomarini / awesome-expression-browser
  😎 A curated list of software and resources for exploring and visualizing (browsing) expression data 😎
  ☆136Updated 11 months ago
• OSCA-source / OSCA
  The package wrapping the book, for deployment via the Bioconductor build system.
  ☆91Updated 11 months ago
• crazyhottommy / reproduce_genomics_paper_figures
  step by step tutorial in the website
  ☆27Updated 7 months ago
• Bioconductor / CSAMA
  Course material for CSAMA: Statistical Data Analysis for Genome Scale Biology
  ☆94Updated last year
• mdozmorov / Cancer_notes
  A continually expanding collection of cancer genomics notes and data
  ☆108Updated 2 months ago
• kevinblighe / E-MTAB-6141
  Data from Lewis, Barnes, Blighe et al., Cell Rep. 2019 Aug 27; 28(9): 2455–2470.e5.
  ☆121Updated 5 years ago
• saezlab / cosmosR
  COSMOS (Causal Oriented Search of Multi-Omic Space) is a method that integrates phosphoproteomics, transcriptomics, and metabolomics data…
  ☆62Updated 3 months ago
• DIYtranscriptomics / DIYtranscriptomics.github.io
  The website for a semester-long 'do-it-yourself' (DIY) transcriptomics course
  ☆24Updated 2 months ago
• BIMSBbioinfo / compgen2021
  ☆77Updated 4 years ago
• saezlab / transcriptutorial
  This is a tutorial to guide the analysis of RNAseq dataset using footprint based tools such as DOROTHEA, PROGENY and CARNIVAL
  ☆56Updated 2 years ago
• sib-swiss / intro-machine-learning-training
  ☆54Updated last week
• sib-swiss / single-cell-training
  SIB course on single cell transcriptomics by mostly using the Seurat pipeline
  ☆84Updated 2 months ago
• hbctraining / DGE_workshop_salmon
  ☆72Updated 3 years ago
• immunitastx / coding_exercise_TCGA_infiltration
  coding exercise using TCGA immune infiltration data
  ☆46Updated last year
• BIMSBbioinfo / compgen_course_2025_module3
  Compgen Course 2025, Module 3 Course Material, Multi-omics integration using deep learning
  ☆64Updated 2 months ago
• biodatascience / compbio_src
  Introduction to Computational Biology - source Rmarkdown files
  ☆63Updated 11 months ago
• hbctraining / main
  ☆55Updated last week
• MangiolaLaboratory / sccomp
  Mixed-effect model to test differences in cell type proportions from single-cell data, in R
  ☆111Updated 3 weeks ago
• liulab-dfci / bioinfo-combio
  The rendered book can be found at https://liulab-dfci.github.io/bioinfo-combio/
  ☆100Updated 3 years ago
• GSEA-MSigDB / GSEA_R
  Updated implementation of the GSEA-P R application for modern R distributions
  ☆97Updated 3 years ago
• reimandlab / ActivePathways
  Integrative pathway enrichment analysis of multivariate omics data
  ☆114Updated 2 months ago
• crazyhottommy / The-world-of-faculty
  resources for faculty
  ☆218Updated 2 years ago
• GangLiLab / genekitr
  🧬 Gene analysis toolkit based on R
  ☆57Updated 9 months ago
• BIMSBbioinfo / VoltRon
  Spatial omic analysis toolbox for multi-resolution and multi-omic integration using image registration
  ☆107Updated 3 weeks ago