dgrun / RaceIDLinks
Algorithm for the inference of cell types from single-cell RNA-seq data.
☆44Updated 9 years ago
Alternatives and similar repositories for RaceID
Users that are interested in RaceID are comparing it to the libraries listed below
Sorting:
- ☆41Updated 4 years ago
- Multi-sample Unified Discriminant ANalysis☆73Updated 2 years ago
- COMET Single-Cell Marker Detection tool☆31Updated 3 years ago
- Single-cell Case Control Analysis☆50Updated 8 months ago
- CONICS: COpy-Number analysis In single-Cell RNA-Sequencing☆74Updated 2 years ago
- Cluster single cells and analyze cell clade relationships with colorful visualizations.☆45Updated 3 years ago
- scRNA-seq cell type identification☆43Updated 5 years ago
- ☆34Updated 6 years ago
- Genotype-free demultiplexing of pooled single-cell RNA-Seq, using a hidden state model for identifying genetically distinct samples withi…☆41Updated 2 years ago
- Algorithm for the inference of cell types and lineage trees from single-cell RNA-seq data.☆42Updated 8 years ago
- ☆55Updated 4 years ago
- Identify genes with spatial expression trends in single-cell gene expression data☆50Updated 7 years ago
- ☆16Updated 6 years ago
- A tool for unsupervised projection of single cell RNA-seq data☆96Updated 4 years ago
- Repository containing all code for secondary analysis in the manuscript "On the design of CRISPR-based single cell molecular screens", Hi…☆26Updated 3 years ago
- BRIE: Bayesian Regression for Isoform Estimate in Single Cells☆42Updated last year
- ConsensusTME Gene Sets and R Script☆39Updated last year
- Compendium to "A Systematic Evaluation of Single Cell RNA-Seq Analysis Pipelines"☆54Updated 4 years ago
- Cell type specific enrichments using finemapped variants and quantitative epigenetic data☆45Updated last year
- R package for robust clustering of single cell RNA sequencing data☆39Updated 2 years ago
- An R-based interface for loom files☆66Updated 5 years ago
- Single-cell Orientation Tracing☆21Updated 3 years ago
- A suite of population scale analysis tools for single-cell genomics data including implementation of Demuxlet / Freemuxlet methods and au…☆52Updated 4 years ago
- Marker gene selection from scRNA-seq data☆15Updated 4 years ago
- A tool for removing doublets from single-cell RNA-seq data☆74Updated 4 years ago
- Scripts needed to generate the figures for the Monocle 2 paper (Qiu et al, 2017)☆29Updated 5 years ago
- Clone of the Bioconductor repository for the scran package.☆42Updated 10 months ago
- Big data Regression for predicting DNase I hypersensitivity☆30Updated 10 months ago
- Mouse cell atlas☆60Updated 5 years ago
- Single-Cell Sequencing Quality Control and Processing Software☆30Updated 5 years ago