chess-genome / chessLinks
Comprehensive Human Expressed SequenceS
☆19Updated 7 months ago
Alternatives and similar repositories for chess
Users that are interested in chess are comparing it to the libraries listed below
Sorting:
- SQUID detects both fusion-gene and non-fusion-gene structural variations from RNA-seq data☆42Updated 3 years ago
- Pairtree is a method for reconstructing cancer evolutionary history in individual patients, and analyzing intratumor genetic heterogeneit…☆42Updated last year
- Differential ATAC-seq toolkit☆28Updated 2 years ago
- Combined mutation recurrence and functional impact to identify coding and non-coding cancer drivers☆15Updated 7 years ago
- Workflow for Sequenza, cellularity and ploidy☆26Updated 5 months ago
- Millefy: Genome browser-like visualization of single-cell RNA-seq dataset☆29Updated 6 years ago
- Pipeline to call neoantigens from intron retention events derived from RNA-Seq data.☆29Updated 5 years ago
- DriverPower☆26Updated last year
- miRge - microRNA alignment software for small RNA-seq data, now at v2.0☆28Updated 3 years ago
- A Package For Predicting The Disruptiveness Of Single Nucleotide Polymorphisms On Transcription Factor Binding Sites.☆32Updated last year
- BANDITS: Bayesian ANalysis of DIfferenTial Splicing☆19Updated 4 months ago
- A p-value-free method for controlling false discovery rates in high-throughput biological data with two conditions☆41Updated 3 years ago
- Method for Identifying Novel Transcripts and Isoforms using Equivalence classes, in cancer and rare disease.☆37Updated last year
- Algorithm for detecting alternative splicing in a population of single cells. See details in Welch et al., Nucleic Acids Research 2016: h…☆23Updated 9 years ago
- DRAGEN Tumor/Normal workflow post-processing☆25Updated 2 years ago
- iread☆25Updated 4 years ago
- Workflow for ZINB-WaVE + DESeq2 intergration for single-cell RNA-seq☆30Updated 5 years ago
- interactive plots for differential expression analysis☆34Updated 7 months ago
- Repo that aids in the detection of microsatellite instabilities (MSI) from sequencing data☆21Updated last year
- Explore the cancer relevance of your gene list☆52Updated last month
- ☆17Updated last year
- ☆22Updated last year
- Transcriptome-wide network☆16Updated 6 years ago
- Slinker offers a succinct and complementary method to visualise RNA-Seq data through superTranscripts.☆19Updated 3 years ago
- Dirichlet Process based methods for subclonal reconstruction of tumours☆32Updated 10 months ago
- Flexible Bayesian inference of mutational signatures☆41Updated 3 years ago
- Smooth-quantile Normalization Adaptation for Inference of co-expression Links☆16Updated 2 years ago
- Clonal and subclonal Copy Number Alteration quality check integrating somatic mutation☆25Updated 2 weeks ago
- A set of tools to annotate VCF files with expression and readcount data☆30Updated 2 weeks ago
- deepStats: a stastitical toolbox for deeptools and genomic signals☆35Updated 4 years ago