SimoneTiberi / BANDITSLinks
BANDITS: Bayesian ANalysis of DIfferenTial Splicing
☆18Updated last year
Alternatives and similar repositories for BANDITS
Users that are interested in BANDITS are comparing it to the libraries listed below
Sorting:
- interactive plots for differential expression analysis☆34Updated 2 months ago
- The official repository for the deepSNV bioconductor packages. Branch master tracks the official Bioconductor development branch.☆17Updated 3 years ago
- V'DJer - B Cell Receptor Repertoire Reconstruction from short read mRNA-Seq data☆29Updated 3 years ago
- SCASA: Single cell transcript quantification tool☆21Updated last year
- A Package For Predicting The Disruptiveness Of Single Nucleotide Polymorphisms On Transcription Factor Binding Sites.☆29Updated last year
- ☆17Updated last year
- R/BioC package to estimate the cell composition of whole blood in DNA methylation samples in microarray or sequencing platforms☆18Updated 2 years ago
- Interactive R package to quantify, analyse and visualise alternative splicing☆37Updated last week
- SQUID detects both fusion-gene and non-fusion-gene structural variations from RNA-seq data☆42Updated 3 years ago
- Introduction to single cell RNAseq data analysis and interpretation course work provided by Harvard Informatics Team.☆16Updated 6 years ago
- Workflow for ZINB-WaVE + DESeq2 intergration for single-cell RNA-seq☆31Updated 4 years ago
- Comprehensive Human Expressed SequenceS☆18Updated 2 months ago
- Bulk RNA-seq Data Processing, Quality Control, and Downstream Analysis Pipeline☆20Updated 8 months ago
- Chromatin ACcessibility and Transcriptomics Unifying Software☆17Updated 10 months ago
- Combined mutation recurrence and functional impact to identify coding and non-coding cancer drivers☆15Updated 6 years ago
- Smooth-quantile Normalization Adaptation for Inference of co-expression Links☆16Updated 2 years ago
- Build single sample pair-based (rule-based) classifiers using top-score pairs or random forest for multi-class problems.☆12Updated 2 years ago
- iread☆25Updated 4 years ago
- ORF Quantification pipeline for Alternative Splicing☆16Updated 4 years ago
- Explore the cancer relevance of your gene list☆52Updated 6 months ago
- A p-value-free method for controlling false discovery rates in high-throughput biological data with two conditions☆39Updated 3 years ago
- 🧭 Navigate single-cell RNA-seq datasets in your web browser.☆29Updated 2 years ago
- DRAGEN Tumor/Normal workflow post-processing☆22Updated last year
- Isoform-level functional RNA-Seq analysis 🧬☆25Updated 3 months ago
- Differential expression and allelic analysis, nonparametric statistics☆29Updated 8 months ago
- Clonal and subclonal Copy Number Alteration quality check integrating somatic mutation☆22Updated 3 months ago
- Differential ATAC-seq toolkit☆27Updated last year
- scpca-nf is the Nextflow workflow for processing Single-cell Pediatric Cancer Atlas Portal data☆15Updated this week
- Provides Quality Control of sequencing samples by deducing if there is batch effect and adjusts for it.☆35Updated 2 years ago
- R package specialized in HLA typing clustering and visualization based on specific similarity metrics☆14Updated 5 years ago