SimoneTiberi / BANDITSLinks
BANDITS: Bayesian ANalysis of DIfferenTial Splicing
β19Updated 4 months ago
Alternatives and similar repositories for BANDITS
Users that are interested in BANDITS are comparing it to the libraries listed below
Sorting:
- The official repository for the deepSNV bioconductor packages. Branch master tracks the official Bioconductor development branch.β17Updated 3 years ago
- Isoform-level functional RNA-Seq analysis π§¬β36Updated 2 months ago
- interactive plots for differential expression analysisβ34Updated 7 months ago
- Interactive R package to quantify, analyse and visualise alternative splicingβ37Updated last week
- β17Updated last year
- SQUID detects both fusion-gene and non-fusion-gene structural variations from RNA-seq dataβ42Updated 3 years ago
- Comprehensive Human Expressed SequenceSβ19Updated 6 months ago
- Flexible Bayesian inference of mutational signaturesβ41Updated 3 years ago
- Chromatin ACcessibility and Transcriptomics Unifying Softwareβ17Updated last year
- β28Updated last year
- A small R package to make sequencing read coverage plots in R.β40Updated last month
- Filter and prioritize fusion callsβ20Updated 2 weeks ago
- Snakemake pipeline for running MAJIQβ23Updated 2 years ago
- Combined mutation recurrence and functional impact to identify coding and non-coding cancer driversβ15Updated 7 years ago
- Provides Quality Control of sequencing samples by deducing if there is batch effect and adjusts for it.β35Updated 2 years ago
- ORF Quantification pipeline for Alternative Splicingβ16Updated 4 years ago
- Create a cromphensive report of DEG list coming from any analysis of RNAseq dataβ27Updated 3 months ago
- Sashimi plots for RNA-seq data using detected transcriptsβ31Updated 10 months ago
- R package specialized in HLA typing clustering and visualization based on specific similarity metricsβ14Updated 6 years ago
- Relative Abundance of Transcripts: An R package for the detection of Differential Transcript isoform Usage.β34Updated 3 years ago
- This repository contains the code to run the ASCETS arm-level copy number events caller for targeted sequencing data. ASCETS produces armβ¦β18Updated 2 years ago
- V'DJer - B Cell Receptor Repertoire Reconstruction from short read mRNA-Seq dataβ29Updated 3 years ago
- Visualization tool for temporal clonal evolution.β18Updated 5 years ago
- A Package For Predicting The Disruptiveness Of Single Nucleotide Polymorphisms On Transcription Factor Binding Sites.β31Updated last year
- Differential expression and allelic analysis, nonparametric statisticsβ30Updated last year
- deepStats: a stastitical toolbox for deeptools and genomic signalsβ35Updated 4 years ago
- Detecting Aberrant Splicing Events from RNA-sequencing dataβ16Updated last year
- β23Updated 4 years ago
- miRge - microRNA alignment software for small RNA-seq data, now at v2.0β28Updated 3 years ago
- Bulk RNA-seq Data Processing, Quality Control, and Downstream Analysis Pipelineβ21Updated last week