BANDITS: Bayesian ANalysis of DIfferenTial Splicing
☆20Oct 23, 2026Updated last week
Alternatives and similar repositories for BANDITS
Users that are interested in BANDITS are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆11Aug 21, 2024Updated 2 years ago
- distinct: a method for differential analyses via hierarchical permutation tests☆15Sep 24, 2026Updated last month
- TOP results by CONfident efFECT Sizes.☆15Dec 9, 2024Updated last year
- Interactive R package to quantify, analyse and visualise alternative splicing☆38May 30, 2026Updated 5 months ago
- ☆31Nov 28, 2024Updated last year
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Transcript specific RNA splicing events lookup☆10Jun 22, 2026Updated 4 months ago
- ☆14May 12, 2023Updated 3 years ago
- ORF Quantification pipeline for Alternative Splicing☆17May 11, 2021Updated 5 years ago
- R Markdown thesis template using the bookdown package☆13Dec 8, 2021Updated 4 years ago
- Splicing-aware time-course network enricher - exploratory analysis for transcriptomics and/or proteomics time series data☆10Dec 11, 2025Updated 10 months ago
- Isoform co-usage networks from single-cell RNA-seq data☆18Feb 21, 2024Updated 2 years ago
- zero-inflated negative binomial gene expression in R☆21Jan 31, 2018Updated 8 years ago
- Two pass alignment for long reads☆22Mar 9, 2021Updated 5 years ago
- ☆11Updated this week
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Package for pooling the results from (dependent) tests☆12Dec 1, 2025Updated 10 months ago
- amplicon/smMIP mapping and analysis pipeline☆11Dec 8, 2022Updated 3 years ago
- Scripts used in the analysis of C elegans dRNAseq data☆14Apr 7, 2024Updated 2 years ago
- A tool for investigating alternative mRNA splicing in next generation mRNA sequence data.☆12Mar 3, 2017Updated 9 years ago
- A tool for annotation-free differential analysis of tissue-specific pre-mRNA alternative splicing patterns☆30Apr 10, 2023Updated 3 years ago
- ☆10Jul 29, 2020Updated 6 years ago
- FulQuant pipeline to identify and quantify transcript isoforms based on Nanopore long-read data☆10Jul 20, 2022Updated 4 years ago
- Code for differential splicing comparison paper (Soneson, Matthes, et al.)☆20Jun 23, 2016Updated 10 years ago
- An R package to Identify, Annoatate and Visialize Isoform Switches with Functional Consequences (from RNA-seq data)☆137Updated this week
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Pipeline to analyze long-read mRNA isoforms and ORF products sequenced in breast cancer using PacBio Single-Molecule technology.☆15May 17, 2022Updated 4 years ago
- Visualizing transcript structure and annotation using ggplot2☆171Aug 24, 2024Updated 2 years ago
- Method for Identifying Novel Transcripts and Isoforms using Equivalence classes, in cancer and rare disease.☆38Jul 1, 2024Updated 2 years ago
- SRA python tools☆11Jun 9, 2021Updated 5 years ago
- Bulk RNA-seq Data Processing, Quality Control, and Downstream Analysis Pipeline☆22May 29, 2026Updated 5 months ago
- Scripts and software supplement for "Gene-level differential analysis at transcript-level resolution" by Yi, Pimentel, Bray and Pachter☆19Feb 20, 2018Updated 8 years ago
- Version II of Mandalorion☆32Feb 1, 2019Updated 7 years ago
- Predict the boundary of transcript start and end from RNA-seq reads alignment☆11Feb 13, 2017Updated 9 years ago
- rbioapi: User-Friendly R Interface to Biologic Web Services' API☆24Oct 17, 2026Updated last week
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Exploring Isoform-specific interactions☆13Jul 23, 2026Updated 3 months ago
- This package implements the Ensemble of Gene Set Enrichment Analyses (EGSEA) method for gene set testing.☆11Jan 21, 2024Updated 2 years ago
- satuRn is a highly performant and scalable method for performing differential transcript usage analyses.☆25Feb 28, 2023Updated 3 years ago
- Full-length transcriptome splicing and mutation analysis☆93Mar 23, 2026Updated 7 months ago
- Differential expression and allelic analysis, nonparametric statistics☆33Oct 1, 2026Updated 3 weeks ago
- Benchmarking long-read RNA-seq analysis tools☆28Feb 17, 2025Updated last year
- A Grammar of Data Manipulation for Omics Data☆21Aug 31, 2020Updated 6 years ago