SimoneTiberi / BANDITSLinks
BANDITS: Bayesian ANalysis of DIfferenTial Splicing
☆18Updated last year
Alternatives and similar repositories for BANDITS
Users that are interested in BANDITS are comparing it to the libraries listed below
Sorting:
- SCASA: Single cell transcript quantification tool☆21Updated last year
- Workflow for ZINB-WaVE + DESeq2 intergration for single-cell RNA-seq☆31Updated 4 years ago
- Comprehensive Human Expressed SequenceS☆18Updated 3 weeks ago
- Interactive R package to quantify, analyse and visualise alternative splicing☆37Updated last week
- R/BioC package to estimate the cell composition of whole blood in DNA methylation samples in microarray or sequencing platforms☆19Updated 2 years ago
- Introduction to single cell RNAseq data analysis and interpretation course work provided by Harvard Informatics Team.☆16Updated 6 years ago
- Pipeline to call neoantigens from intron retention events derived from RNA-Seq data.☆28Updated 4 years ago
- A Package For Predicting The Disruptiveness Of Single Nucleotide Polymorphisms On Transcription Factor Binding Sites.☆29Updated last year
- Smooth-quantile Normalization Adaptation for Inference of co-expression Links☆16Updated 2 years ago
- Differential expression and allelic analysis, nonparametric statistics☆29Updated 7 months ago
- Combined mutation recurrence and functional impact to identify coding and non-coding cancer drivers☆15Updated 6 years ago
- Isoform-level functional RNA-Seq analysis 🧬☆25Updated 2 months ago
- TSIS: an R package to infer time-series isoform switch of alternative splicing☆3Updated 2 years ago
- Pairtree is a method for reconstructing cancer evolutionary history in individual patients, and analyzing intratumor genetic heterogeneit…☆37Updated last year
- Chromatin ACcessibility and Transcriptomics Unifying Software☆16Updated 9 months ago
- SQUID detects both fusion-gene and non-fusion-gene structural variations from RNA-seq data☆43Updated 3 years ago
- interactive plots for differential expression analysis☆32Updated last month
- HOT regions paper☆11Updated 6 years ago
- Explore the cancer relevance of your gene list☆51Updated 5 months ago
- V'DJer - B Cell Receptor Repertoire Reconstruction from short read mRNA-Seq data☆29Updated 2 years ago
- iread☆25Updated 4 years ago
- Code for EpiMap data browser☆14Updated last year
- Python function for TMB snake plots☆16Updated 5 years ago
- ☆17Updated last year
- A p-value-free method for controlling false discovery rates in high-throughput biological data with two conditions☆39Updated 3 years ago
- Millefy: Genome browser-like visualization of single-cell RNA-seq dataset☆29Updated 5 years ago
- NeoFuse is a user-friendly pipeline for the prediction of fusion neoantigens from tumor RNA-seq data.☆19Updated 2 years ago
- Build single sample pair-based (rule-based) classifiers using top-score pairs or random forest for multi-class problems.☆12Updated 2 years ago
- R package specialized in HLA typing clustering and visualization based on specific similarity metrics☆12Updated 5 years ago
- Snakemake pipeline for running MAJIQ☆23Updated last year