czi-hca-comp-tools / easy-data
easy access to benchmark datasets
☆50Updated 6 years ago
Alternatives and similar repositories for easy-data:
Users that are interested in easy-data are comparing it to the libraries listed below
- Preprocessing of single-cell RNA-Seq (deprecated)☆62Updated 5 years ago
- Normalization for single cell RNA-seq data☆47Updated last year
- ☆28Updated 6 years ago
- Examples analyses using the single-cell RNA-seq data from mouse cell atlases☆23Updated 5 years ago
- ☆28Updated 2 years ago
- post-clustering differential expression test☆35Updated 5 years ago
- scNMT-seq gastrulation☆42Updated 2 years ago
- ☆53Updated last month
- COMET Single-Cell Marker Detection tool☆31Updated 2 years ago
- Assorted thoughts, explanations and justifications for code in the scran package and the simpleSingleCell workflow.☆44Updated 4 years ago
- supporting code for the multinomial single cell RNA-Seq paper☆51Updated 4 years ago
- Multi-sample Unified Discriminant ANalysis☆73Updated 2 years ago
- Dynamic models for single-cell RNA-seq time series.☆40Updated 6 years ago
- ☆62Updated 3 weeks ago
- Algorithm for the inference of cell types from single-cell RNA-seq data.☆44Updated 8 years ago
- Clustering cells from single cell RNA seq assays☆46Updated 6 years ago
- Big data Regression for predicting DNase I hypersensitivity☆30Updated 7 months ago
- Identify cell barcodes from single-cell genomics sequencing experiments☆43Updated 3 years ago
- ☆40Updated 4 years ago
- An archived version of the scater repository, see https://github.com/davismcc/scater for the active version.☆64Updated 7 years ago
- ☆33Updated 5 years ago
- consistent quantification of external RNA-seq data sets☆58Updated last year
- Single Cell Epigenome-based Inference of Activity☆19Updated last year
- ☆22Updated 5 years ago
- ☆59Updated 7 months ago
- ☆67Updated 6 years ago
- processes GoT amplicon data and generates a table of metrics☆29Updated 2 years ago
- An R Package for Geneset Enrichment Workflows☆76Updated 3 weeks ago
- Single-cell Scalable Visualization and Analytics☆25Updated 6 years ago
- ☆37Updated 8 years ago