LabTranslationalArchitectomics / riboWaltz
optimization of ribosome P-site positioning in ribosome profiling data
☆50Updated last month
Alternatives and similar repositories for riboWaltz:
Users that are interested in riboWaltz are comparing it to the libraries listed below
- ☆56Updated 3 years ago
- Ribo-seq TIS Hunter, predicting translation initiation sites and ORFs using riboseq data☆38Updated 4 months ago
- A tool for accurately detecting actively translating ORFs from Ribo-seq data☆36Updated 2 months ago
- REDItools are python scripts to investigate RNA editing at genomic scale.☆63Updated 5 months ago
- RepEnrich2 is an updated method to estimate repetitive element enrichment using high-throughput sequencing data.☆39Updated 3 years ago
- Estimate locus specific human LINE-1 expression.☆33Updated 2 years ago
- A Perl/R pipeline for plotting metagenes☆37Updated 3 years ago
- ☆60Updated 8 months ago
- A method for circular DNA detection based on probabilistic mapping of ultrashort reads☆62Updated 8 months ago
- Tutorial Website☆57Updated 4 years ago
- A package for quantifying transposable elements at a locus level for RNAseq datasets.☆25Updated 2 months ago
- fork of RSeQC python RNAseq metrics suit of tools☆47Updated 6 years ago
- A toolset for profiling alternative splicing events in RNA-Seq data.☆80Updated 2 months ago
- Quantification of transposable element expression using RNA-seq☆65Updated last year
- HMMRATAC peak caller for ATAC-seq data☆100Updated 5 months ago
- trackplot is a tool for visualizing various next-generation sequencing (NGS) data, including DNA-seq, RNA-seq, single-cell RNA-seq and fu…☆89Updated 2 weeks ago
- ☆50Updated 6 years ago
- Allele-specific alignment sorting☆55Updated 2 years ago
- RiboPlotR package for Ribo-plot☆14Updated last year
- release version☆51Updated 2 years ago
- Software for Quantifying Interspersed Repeat Expression☆55Updated 2 years ago
- A list of alternative splicing analysis resources☆43Updated 2 weeks ago
- perl cworld module and collection of utility/analysis scripts for C data (3C, 4C, 5C, Hi-C)☆66Updated 5 years ago
- EasyFuse is a pipeline for accurate fusion gene detection from RNA-seq data.☆57Updated 4 months ago
- An R package to Identify, Annoatate and Visialize Isoform Switches with Functional Consequences (from RNA-seq data)☆112Updated 2 months ago
- A toolkit for QC and visualization of ATAC-seq results.☆68Updated 3 months ago
- Workflows for processing RNA data for germline short variant discovery with GATK v4 and related tools☆72Updated 3 years ago
- Single cell Nanopore sequencing data for Genotype and Phenotype☆50Updated this week
- RNA editing quantification in deep transcriptome data☆15Updated 2 years ago
- New version of JACUSA -> 2.0☆24Updated last week