LabTranslationalArchitectomics / riboWaltzLinks
optimization of ribosome P-site positioning in ribosome profiling data
☆59Updated 11 months ago
Alternatives and similar repositories for riboWaltz
Users that are interested in riboWaltz are comparing it to the libraries listed below
Sorting:
- Ribo-seq TIS Hunter, predicting translation initiation sites and ORFs using riboseq data☆46Updated 3 months ago
- REDItools are python scripts to investigate RNA editing at genomic scale.☆69Updated 6 months ago
- ☆60Updated 6 months ago
- Workflows for processing RNA data for germline short variant discovery with GATK v4 and related tools☆84Updated 4 years ago
- A tool for the calculation of RNA-editing index for RNA seq data☆45Updated last month
- An R package to Identify, Annoatate and Visialize Isoform Switches with Functional Consequences (from RNA-seq data)☆124Updated this week
- A Perl/R pipeline for plotting metagenes☆37Updated 4 years ago
- A tool for accurately detecting actively translating ORFs from Ribo-seq data☆40Updated last year
- A method for circular DNA detection based on probabilistic mapping of ultrashort reads☆65Updated last year
- RepEnrich2 is an updated method to estimate repetitive element enrichment using high-throughput sequencing data.☆41Updated 3 years ago
- A list of alternative splicing analysis resources☆47Updated 10 months ago
- Full-length transcriptome splicing and mutation analysis☆86Updated last year
- Publication quality NGS track plotting☆117Updated 3 months ago
- Estimation of Promoter Activity from RNA-Seq data☆56Updated 6 months ago
- fork of RSeQC python RNAseq metrics suit of tools☆49Updated 7 years ago
- ☆50Updated 4 years ago
- This package computes informative enrichment and quality measures for ChIP-seq/DNase-seq/FAIRE-seq/MNase-seq data. It can also be used to…☆62Updated 5 years ago
- release version☆58Updated 3 years ago
- A toolset for profiling alternative splicing events in RNA-Seq data.☆87Updated last year
- DCC uses output from the STAR read mapper to systematically detect back-splice junctions in next-generation sequencing data. DCC applies …☆38Updated 3 years ago
- HiC uniform processing pipeline☆63Updated 2 years ago
- RNA-Seq analysis workflow☆105Updated 4 years ago
- Tutorial Website☆63Updated 5 years ago
- From RNA-seq raw reads to enriched pathways by DEGs☆33Updated last year
- Quantification of transposable element expression using RNA-seq☆82Updated 2 years ago
- Unsorted scripts for bioinformatics☆61Updated 4 years ago
- Single cell Nanopore sequencing data for Genotype and Phenotype☆57Updated 8 months ago
- tools to find circRNAs in RNA-seq data☆45Updated 8 years ago
- An easy-to-use Hi-C data processing software supporting distributed computation.☆62Updated last year
- ☆49Updated 3 years ago