Imamachi-n / NGS-TutorialLinks
NGS Tutorial
☆15Updated 8 years ago
Alternatives and similar repositories for NGS-Tutorial
Users that are interested in NGS-Tutorial are comparing it to the libraries listed below
Sorting:
- A bioinformatics pipeline for viral transcriptome detection and quantification considering splicing.☆36Updated 3 years ago
- This repository contains course materials from JAX-BD2K workshop.☆32Updated 6 years ago
- ☆15Updated 3 years ago
- Interactive R package to quantify, analyse and visualise alternative splicing☆37Updated this week
- deepStats: a stastitical toolbox for deeptools and genomic signals☆35Updated 4 years ago
- An R interface to the MEME Suite☆53Updated 5 months ago
- RNA editing quantification in deep transcriptome data☆15Updated 3 months ago
- ☆29Updated 6 years ago
- interactive plots for differential expression analysis☆34Updated 4 months ago
- A web-based application to perform Gene Set Enrichment Analysis (GSEA) using clusterProfiler and shiny R libraries☆16Updated 5 years ago
- This github repository contains code to reproduce the analysis in our paper "Variability in estimated gene expression among commonly used…☆29Updated last year
- Sigflow: Streamline Analysis Workflows for Mutational Signatures, https://github.com/ShixiangWang/sigflow/pkgs/container/sigflow☆29Updated last year
- A continually expanding collection of RNA-seq tools☆52Updated last month
- Accurate estimation and robust modelling of translation dynamics at codon resolution☆20Updated 8 years ago
- Fork from https://bitbucket.org/mcgranahanlab/lohhla/src, modified for MSKCC needs☆31Updated 2 years ago
- documentation for trackViewer☆29Updated 6 years ago
- ChIP-seq DC and QC Pipeline☆36Updated 4 years ago
- Genomic data interpretation and visualization Workshop☆21Updated last month
- MeRIP-seq analysis pipeline arranged multiple alignment tools, peakCalling tools, Merge Peaks' methods and methylation analysis methods.☆21Updated 4 years ago
- Tool for RNA-Seq analysis.☆39Updated 3 years ago
- predicts neoepitopes from phased somatic mutations detected using tumor/normal DNA-seq data☆27Updated 2 years ago
- direct comparison of circular and linear RNA expression☆23Updated 4 years ago
- Pipeline for identifying viral integration and fusion mRNA reads from NGS data. Manuscript is currently in preparation.☆29Updated 4 years ago
- Rapid analysis and visualisation for bulk RNA-seq, psuedo-bulk RNA-seq, GeoMx and Proteomic datasets.☆30Updated last year
- A standalone interactive application for detecting biological significance on a set of genes☆40Updated 4 years ago
- ☆44Updated 7 years ago
- Python package to annotate and visualize gene fusions.☆64Updated last year
- Filters for false-positive mutation calls in NGS☆34Updated 6 years ago
- Identifying differentially methylated regions from MethylC-seq (bisulfite-sequencing) data☆28Updated 2 years ago
- ChIP-Atlas: Browse and analyze all public ChIP/DNase-seq data on your browser☆79Updated 3 weeks ago