Analysis pipeline for Ribosome footprinting data
☆25Jan 29, 2026Updated 2 months ago
Alternatives and similar repositories for Ribo-seq
Users that are interested in Ribo-seq are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A list of bioinformatic tools for working with Ribo-Seq data☆21Apr 11, 2024Updated last year
- RiboDiff: Tool to detect changes in translational efficiency based on ribosome footprinting data☆24Oct 3, 2016Updated 9 years ago
- Ribo-seq TIS Hunter, predicting translation initiation sites and ORFs using riboseq data☆51Oct 21, 2025Updated 5 months ago
- Analyses of Ribo-seq rRNA fragments for Differential Ribosome Heterogeneity and Collision predictions☆12Mar 31, 2026Updated last week
- RiboPlotR package for Ribo-plot☆16Jun 12, 2025Updated 9 months ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- Pipeline for Analysis of ChIP-Seq data☆10May 8, 2024Updated last year
- Identifying genome-wide translated open reading frames using ribosome profiling☆25May 30, 2023Updated 2 years ago
- optimization of ribosome P-site positioning in ribosome profiling data☆59Feb 24, 2025Updated last year
- Expedition suite for computing, visualizing, and analyzing single-cell alternative splicing data☆11Jun 29, 2017Updated 8 years ago
- bioinformatics learning☆13Oct 10, 2023Updated 2 years ago
- NGS Tutorial☆15Apr 22, 2017Updated 8 years ago
- A tool for accurately detecting actively translating ORFs from Ribo-seq data☆41Feb 14, 2026Updated last month
- release version☆59Jul 29, 2022Updated 3 years ago
- m(6)A methylation analysis☆10Mar 9, 2019Updated 7 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- ☆11Mar 25, 2019Updated 7 years ago
- Pipeline code for creating a fully haplotype-resolved assembly from a combination of PacBio/ONT long reads and Illumina Strand-seq data☆16Apr 2, 2024Updated 2 years ago
- 4C-seq processing pipeline☆26Mar 17, 2025Updated last year
- ☆16Nov 16, 2023Updated 2 years ago
- Integrating Ribo-SEQ Upstream and Downstream Analysis☆12Oct 14, 2024Updated last year
- ☆25Jun 5, 2025Updated 10 months ago
- ☆23Jun 27, 2023Updated 2 years ago
- ☆12Sep 8, 2021Updated 4 years ago
- Reconstruction of higher order chromatin from scRNA-seq and scATAC-seq☆14Mar 11, 2026Updated 3 weeks ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting with the flexibility to host WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Cloudways by DigitalOcean.
- Hifiasm: a haplotype-resolved assembler for accurate Hifi reads☆21Dec 24, 2020Updated 5 years ago
- Single-Cell Omics for Transcriptome CHaracterization (SCOTCH): isoform-level characterization of gene expression through long-read single…☆19Mar 28, 2026Updated last week
- Pipeline for the analysis of ribosome profiling, or Ribo-seq (also named ribosome footprinting) data.☆25Mar 6, 2026Updated last month
- Modular blocks to build Snakemake workflows for reproducible NGS analyses☆22Sep 7, 2019Updated 6 years ago
- Consensus genome annotation using OMA☆31Jan 14, 2026Updated 2 months ago
- A copy of RiboTaper v1.2☆10Mar 14, 2021Updated 5 years ago
- A toolset to analyze genomic footprinting data☆20Dec 5, 2025Updated 4 months ago
- An analysis pipeline for Nanopore direct-RNA sequencing☆13Jul 24, 2025Updated 8 months ago
- First version of PORE-cupine. Detecting SHAPE modification using direct RNA sequencing☆14Jul 2, 2023Updated 2 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click and start building anything your business needs.
- Pipeline for Cut&Tag analysis☆25Apr 15, 2025Updated 11 months ago
- Custom scripts for monotreme genome project☆19Jan 12, 2021Updated 5 years ago
- ☆17Sep 9, 2020Updated 5 years ago
- “When everything is connected to everything else, for better or worse, everything matters.” Bruce Mau☆20Jul 13, 2020Updated 5 years ago
- Tool for ribo-seq analysis. Most of the functionality moved to ribotricer (https://github.com/smithlabcode/ribotricer)☆13Mar 5, 2021Updated 5 years ago
- do some exercise☆14Dec 2, 2025Updated 4 months ago
- A project to develop the R Shiny applications.☆12May 13, 2019Updated 6 years ago