Bushell-lab / Ribo-seqLinks
Analysis pipeline for Ribosome footprinting data
☆22Updated last month
Alternatives and similar repositories for Ribo-seq
Users that are interested in Ribo-seq are comparing it to the libraries listed below
Sorting:
- ☆50Updated 6 years ago
- A Perl/R pipeline for plotting metagenes☆37Updated 3 years ago
- perl cworld module and collection of utility/analysis scripts for C data (3C, 4C, 5C, Hi-C)☆65Updated 6 years ago
- optimization of ribosome P-site positioning in ribosome profiling data☆52Updated 4 months ago
- SpecHLA reconstructs entire diploid sequences of HLA genes and infers LOH events. It supports HLA-A, -B, -C, -DPA1, -DPB1, -DQA1, -DQB1, …☆46Updated 3 months ago
- ☆58Updated 3 years ago
- Tutorial Website☆59Updated 4 years ago
- A method for circular DNA detection based on probabilistic mapping of ultrashort reads☆63Updated 11 months ago
- Identifying genome-wide translated open reading frames using ribosome profiling☆23Updated 2 years ago
- Dynamics analysis of Alternative PolyAdenylation from RNA-seq☆61Updated last year
- Long-read Isoform Quantification and Analysis☆38Updated 3 months ago
- release version☆54Updated 2 years ago
- RepEnrich2 is an updated method to estimate repetitive element enrichment using high-throughput sequencing data.☆39Updated 3 years ago
- bioinformatic pipeline for GLORI☆20Updated last year
- A package for quantifying transposable elements at a locus level for RNAseq datasets.☆27Updated 4 months ago
- A list of alternative splicing analysis resources☆44Updated 3 months ago
- New version of JACUSA -> 2.0☆27Updated last month
- Estimate locus specific human LINE-1 expression.☆35Updated 2 years ago
- ☆26Updated 3 years ago
- Summarise and plot data from long-read ONT (direct RNA/cDNA) BAM files☆14Updated last year
- ☆24Updated 4 years ago
- Circular RNA Identification for Nanopore Sequencing☆19Updated last year
- Some NGS workflow created by snakemake☆13Updated 5 months ago
- A fast and robust pre-processing pipeline for bulk or single-cell whole-genome bisulfite sequencing (WGBS) data.☆35Updated 3 years ago
- A tool for accurately detecting actively translating ORFs from Ribo-seq data☆37Updated 4 months ago
- ☆11Updated 2 months ago
- 4C-seq processing pipeline☆23Updated 3 months ago
- trackplot is a tool for visualizing various next-generation sequencing (NGS) data, including DNA-seq, RNA-seq, single-cell RNA-seq and fu…☆91Updated last month
- ☆18Updated last year
- tools to find circRNAs in RNA-seq data☆43Updated 7 years ago