Alternatives and similar repositories for bioinformatics_links

Users that are interested in bioinformatics_links are comparing it to the libraries listed below

• jmzeng1314 / ChIP-seq-analysis
  ChIP-seq analysis notes from Tommy Tang
  ☆19Updated 9 years ago
• jmzeng1314 / cnv
  ☆31Updated 7 years ago
• jmzeng1314 / rna-seq-example
  An analysis of Arabidopsis RNA-seq data (hy5 mutant and wt, two replicates each; SRA accession SRX029582)
  ☆14Updated 13 years ago
• jmzeng1314 / survival
  ☆17Updated 5 years ago
• jmzeng1314 / my-perl
  some short but practical PERL script in NGS data analysis
  ☆16Updated 7 years ago
• genome-vendor / bsmap
  Unofficial repo for software vendoring or packaging purposes
  ☆22Updated 7 years ago
• jmzeng1314 / BPscRNAseq
  ☆10Updated 6 years ago
• jmzeng1314 / myScRNA-seq
  ☆14Updated 7 years ago
• marvin-jens / find_circ
  tools to find circRNAs in RNA-seq data
  ☆43Updated 7 years ago
• ay-lab / ATACProc
  ATAC-seq processing pipeline
  ☆33Updated 3 years ago
• jmzeng1314 / TF_map
  ☆13Updated 4 years ago
• scottzijiezhang / m6A-seq_analysis_workflow
  A pipeline to process m6A-seq data and down stream analysis.
  ☆45Updated 5 years ago
• xuzhougeng / RNA-seq-downstream-analysis
  Arabidopsis RNA_-seq downstream analysis shiny app
  ☆30Updated 6 years ago
• QuKunLab / ATAC-pipe
  Analysis pipeline for ATAC-seq Data
  ☆61Updated 3 years ago
• jmzeng1314 / IRseq
  ☆10Updated 8 years ago
• xuzhougeng / R-ChIP-data-analysis
  ☆50Updated 6 years ago
• stjude / ROSE
  ROSE: RANK ORDERING OF SUPER-ENHANCERS
  ☆50Updated last year
• yezhengSTAT / CUTTag_tutorial
  Tutorial Website
  ☆59Updated 4 years ago
• ENCODE-DCC / dna-me-pipeline
  DCC/DAC methylation pipeline source
  ☆56Updated 5 years ago
• KafsackLab / scRNAseq-Malaria
  Codes associated with the Poran, Nötzel et al. paper titled "Single-cell RNA-seq reveals a signature of sexual commitment in malaria para…
  ☆9Updated 7 years ago
• 3UTR / DaPars2
  Dynamics analysis of Alternative PolyAdenylation from RNA-seq
  ☆61Updated last year
• shawnzhangyx / cvdc_scripts
  scripts for analyzing the CVDC data.
  ☆19Updated 5 years ago
• ShixiangWang / install_GISTIC
  Install GISTIC2 by one line code; GISTIC2 docker image
  ☆42Updated 2 years ago
• hemberg-lab / SC3-paper-figures
  Scripts to recreate figures from the SC3 paper
  ☆40Updated 8 years ago
• gerstung-lab / MutationTimeR
  An R package to time somatic mutations
  ☆62Updated 4 years ago
• crazyhottommy / pyflow-ATACseq
  ATAC-seq snakemake pipeline
  ☆89Updated 5 years ago
• MonashBioinformaticsPlatform / RSeQC
  fork of RSeQC python RNAseq metrics suit of tools
  ☆48Updated 6 years ago
• xryanglab / RiboCode
  release version
  ☆54Updated 3 years ago
• ElkonLab / scAPA
  This is a package and a shell script for alternative polyadenylation (APA) analysis of 3' tag single-cell RNA-seq data.
  ☆22Updated 3 years ago
• gxiaolab / REDITs
  RNA editing tests
  ☆17Updated 4 years ago