sunyumail93 / PipeRiboseqLinks
A comprehensive pipeline for Ribo-seq data analysis
☆11Updated 6 months ago
Alternatives and similar repositories for PipeRiboseq
Users that are interested in PipeRiboseq are comparing it to the libraries listed below
Sorting:
- A R script to perform clustering of gene expression time-series RNA-seq data with Mfuzz.☆23Updated 6 years ago
- ☆20Updated 2 years ago
- single-cell-Isoform-Sequencing-Analysis-Tools: New and powerful tools brings single-cell RNA sequencing to the Isoform level and single m…☆26Updated last year
- Extract Sequence from Genome According to Annotation File☆39Updated 9 months ago
- ☆15Updated 3 years ago
- ☆12Updated 5 years ago
- TEProf2 Pipeline used to find promoters and predict protein sequences from RNA-sequencing data☆27Updated 2 years ago
- Identifying genome-wide translated open reading frames using ribosome profiling☆24Updated 2 years ago
- ☆23Updated 10 months ago
- an R/Shiny application for interactive creation of non-circular plots of whole genomes☆45Updated 8 months ago
- ☆23Updated 4 years ago
- Predicting TF sequence-specificity similarity with weighted alignments☆13Updated 6 years ago
- ☆27Updated 3 years ago
- ☆26Updated 2 years ago
- ggideogram is a ggplot2 extension package for drawing chromosome diagrams☆17Updated last year
- APAlyzer is a toolkit for bioinformatic analysis of alternative polyadenylation (APA) events using RNA sequencing data. Our main approach…☆12Updated last year
- An R package for time course sequencing data analysis☆20Updated 2 years ago
- scripts for the integrating ATAC-seq, RNA-seq and CHi-C paper☆25Updated 3 years ago
- ☆12Updated 8 months ago
- ☆34Updated 2 months ago
- Micro DNA identification☆23Updated 4 years ago
- ORF Quantification pipeline for Alternative Splicing☆16Updated 4 years ago
- Model-based analysis of APA using 3' end-linked reads☆11Updated 4 years ago
- An R package to visualize bigwigs.☆32Updated 3 years ago
- IsoVis enables fast and informative visualization of isoform structures and expression levels.☆13Updated last month
- ☆22Updated 2 years ago
- West Coast Dream Team Whole Genome Bisulfite Sequencing☆15Updated 2 months ago
- General analysis of HiC data, including compartment A/B, domains and loops.☆14Updated 2 years ago
- Statistically Significant loops from HiChIP data☆46Updated last year
- A Deep Learning-Based Model for Quantifying Transposable Elements in Single-Cell Sequencing Data☆32Updated last month