hsinyenwu / RiboPlotRLinks
RiboPlotR package for Ribo-plot
☆15Updated last week
Alternatives and similar repositories for RiboPlotR
Users that are interested in RiboPlotR are comparing it to the libraries listed below
Sorting:
- Identifying genome-wide translated open reading frames using ribosome profiling☆23Updated 2 years ago
- single-cell-Isoform-Sequencing-Analysis-Tools: New and powerful tools brings single-cell RNA sequencing to the Isoform level and single m…☆24Updated 11 months ago
- A Perl/R pipeline for plotting metagenes☆37Updated 3 years ago
- RepEnrich2 is an updated method to estimate repetitive element enrichment using high-throughput sequencing data.☆39Updated 3 years ago
- interactive visualization of single-cell transcriptomes☆11Updated last year
- SEASTAR - Systematic Evaluation of Alternative transcription STArt site in RNA☆13Updated 7 years ago
- CLIP-seq Analysis of Multi-mapped reads☆30Updated 3 years ago
- RNA editing quantification in deep transcriptome data☆15Updated 2 years ago
- code associated with crane-nature-2015, 10.1038/nature14450☆35Updated 9 years ago
- A tool for accurately detecting actively translating ORFs from Ribo-seq data☆37Updated 4 months ago
- SingleCell Nanopore sequencing data analysis☆60Updated 3 weeks ago
- Scripts to import your FeatureCounts output into DEXSeq☆33Updated 6 years ago
- ☆58Updated 3 years ago
- Long-read Isoform Quantification and Analysis☆38Updated 3 months ago
- Demultiplexes a fastq.☆44Updated 4 years ago
- ☆15Updated 2 years ago
- GIREMI is a method that can identify RNA editing sites using one RNA-seq data set without requiring genome sequence data.☆44Updated 8 years ago
- Estimation of Promoter Activity from RNA-Seq data☆53Updated 3 years ago
- Estimate locus specific human LINE-1 expression.☆35Updated 2 years ago
- a toolset for mining multi-dimensional features of the translatome with ribosome profiling data☆18Updated 5 months ago
- A statistical tool to detect differential alternative splicing events using single-cell RNA-seq☆22Updated last year
- ☆23Updated 4 years ago
- Locate transgenic insertion sites☆11Updated 2 years ago
- Identifying differentially methylated regions from MethylC-seq (bisulfite-sequencing) data☆28Updated 2 years ago
- splicekit: an integrative toolkit for splicing analysis from short-read RNA-seq☆17Updated 3 months ago
- SpecHLA reconstructs entire diploid sequences of HLA genes and infers LOH events. It supports HLA-A, -B, -C, -DPA1, -DPB1, -DQA1, -DQB1, …☆46Updated 2 months ago
- A computational workflow for exitron splicing identification☆12Updated 9 months ago
- Micro DNA identification☆23Updated 3 years ago
- RNA-seq workflow: differential transcript usage☆21Updated last year
- Define regions in the genome☆31Updated 3 years ago