hsinyenwu / RiboPlotRLinks
RiboPlotR package for Ribo-plot
☆15Updated 3 months ago
Alternatives and similar repositories for RiboPlotR
Users that are interested in RiboPlotR are comparing it to the libraries listed below
Sorting:
- Estimate locus specific human LINE-1 expression.☆39Updated last week
- A Perl/R pipeline for plotting metagenes☆37Updated 4 years ago
- Workflows for processing RNA data for germline short variant discovery with GATK v4 and related tools☆80Updated 4 years ago
- A list of alternative splicing analysis resources☆46Updated 5 months ago
- Estimation of Promoter Activity from RNA-Seq data☆53Updated 2 months ago
- Tutorial Website☆59Updated 4 years ago
- Quantification of transposable element expression using RNA-seq☆75Updated last year
- Links to ATAC-seq analysis tools☆70Updated 4 years ago
- Dynamics analysis of Alternative PolyAdenylation from RNA-seq☆61Updated 2 years ago
- Notes on ChIP-seq and other-seq-related tools☆26Updated 2 months ago
- RepEnrich2 is an updated method to estimate repetitive element enrichment using high-throughput sequencing data.☆40Updated 3 years ago
- A tool for accurately detecting actively translating ORFs from Ribo-seq data☆39Updated 7 months ago
- ☆58Updated 2 months ago
- REDItools are python scripts to investigate RNA editing at genomic scale.☆68Updated 2 months ago
- dcHiC: Differential compartment analysis for Hi-C datasets☆72Updated last year
- A tool for the calculation of RNA-editing index for RNA seq data☆44Updated last year
- Full-length transcriptome splicing and mutation analysis☆84Updated last year
- optimization of ribosome P-site positioning in ribosome profiling data☆53Updated 6 months ago
- A modular, containerized pipeline for ATAC-seq data processing☆59Updated 4 months ago
- Single Cell Long Read is a suite of tools dedicated to Cell barcode / UMI assignment and analysis of highly multiplexed single cell Nanop…☆75Updated 2 years ago
- perl cworld module and collection of utility/analysis scripts for C data (3C, 4C, 5C, Hi-C)☆67Updated 6 years ago
- Identifying genome-wide translated open reading frames using ribosome profiling☆23Updated 2 years ago
- SEASTAR - Systematic Evaluation of Alternative transcription STArt site in RNA☆13Updated 7 years ago
- Ribo-seq TIS Hunter, predicting translation initiation sites and ORFs using riboseq data☆43Updated 9 months ago
- a toolset for mining multi-dimensional features of the translatome with ribosome profiling data☆18Updated 2 months ago
- ☆63Updated last year
- Data of genome annotation from full-stack ChromHMM model trained with 1032 datasets from 127 reference epigenomes☆37Updated last year
- A quickstart tool for AmpliconArchitect. Performs all preliminary steps (alignment, CNV calling, seed interval detection) required prior …☆68Updated this week
- Publication quality NGS track plotting☆114Updated 3 years ago
- Scripts to import your FeatureCounts output into DEXSeq☆34Updated 6 years ago