Analyses of Ribo-seq rRNA fragments for Differential Ribosome Heterogeneity and Collision predictions
☆17Sep 8, 2026Updated last week
Alternatives and similar repositories for ARF
Users that are interested in ARF are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆26Jun 5, 2025Updated last year
- optimization of ribosome P-site positioning in ribosome profiling data☆63Feb 24, 2025Updated last year
- a toolset for mining multi-dimensional features of the translatome with ribosome profiling data☆19Jul 19, 2025Updated last year
- high-performance BED-to-GTF converter written in Rust☆21Aug 9, 2026Updated last month
- ☆12Updated this week
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- A Nextflow DSL2 pipeline to perform ribo-seq data analysis and comprehensive quality control.☆22May 25, 2026Updated 3 months ago
- A Docker workflow to work reproducibly with papaja in RStudio☆10Nov 16, 2021Updated 4 years ago
- Detection of differential translated genes using Ribo-seq☆17Apr 10, 2021Updated 5 years ago
- This computational method has been published in BMC genomics as: "Identifying branch-specific positive selection throughout the regulato…☆18Jun 15, 2026Updated 3 months ago
- Study of TE evolution in a population of genomes☆12Dec 11, 2023Updated 2 years ago
- scAB detects multiresolution cell states with clinical significance☆23Nov 14, 2022Updated 3 years ago
- A list of bioinformatic tools for working with Ribo-Seq data☆26Apr 11, 2024Updated 2 years ago
- ☆14May 22, 2025Updated last year
- Cell-type Assignment and Module Extraction based on a heterogeneous graph neural network.☆13Jan 27, 2024Updated 2 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- ☆31Sep 22, 2023Updated 2 years ago
- Nextflow pipeline to extend reference annotation with nanopore reads, classify novel genes (mRNAs vs lncRNAs).☆17Updated this week
- A tutorial for the free Inkscape cross-platform vector graphics editor.☆13Oct 4, 2016Updated 9 years ago
- Programs used in the lab for various tasks☆14Jul 3, 2026Updated 2 months ago
- GraphProt: modelling binding preferences of RNA-binding proteins☆21Jul 19, 2018Updated 8 years ago
- R code for Combining gene mutation with gene expression data improves outcome prediction in myelodysplastic syndromes☆13Mar 23, 2016Updated 10 years ago
- A comprehensive tool for processing, analyzing and visulizing single cell chromatin accessibility sequencing data☆84Mar 16, 2026Updated 6 months ago
- Public version of the AIDD consortium code base☆11Mar 25, 2025Updated last year
- DOLPHIN: Advances Single-cell RNA-seq Analysis Beyond Gene-Level by Integrating Exon-Level Quantification and Junction Reads with Deep Ne…☆16Sep 7, 2026Updated 2 weeks ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Toolbox package for organizing and working with TCGA data☆31Jul 2, 2026Updated 2 months ago
- ☆54Feb 12, 2024Updated 2 years ago
- An R package for the processing of plate reader and flow cytometry data. This includes: normalisation and calibration of plate reader dat…☆11Aug 28, 2026Updated 3 weeks ago
- Computational framework to identify promoter sequences from RNA-seq datasets☆11Sep 27, 2023Updated 2 years ago
- snakemake-based workflows☆12Jul 20, 2022Updated 4 years ago
- Pipeline for Ribosome Profiling Data☆19Sep 3, 2026Updated 2 weeks ago
- ☆15Aug 25, 2022Updated 4 years ago
- Scripts written to demo R for Biochemists☆10Jan 12, 2026Updated 8 months ago
- Tools for haplotype-wise reconstruction of pseudomolecules☆23Jul 29, 2026Updated last month
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- RNA editing detection based on machine learning☆10Feb 7, 2018Updated 8 years ago
- An open-source platform for developing protein models beyond AlphaFold.☆11Jul 15, 2025Updated last year
- ☆13Updated this week
- ☆13Jun 28, 2024Updated 2 years ago
- A web app to search pubmed☆12Jul 8, 2024Updated 2 years ago
- R is said to get way faster if you change the BLAS library it is linked to. Is it true?☆11Mar 11, 2021Updated 5 years ago
- collection of errors in R as well as explanations☆15Jun 8, 2021Updated 5 years ago