fallerlab / ARFLinks
Analyses of Ribo-seq rRNA fragments for Differential Ribosome Heterogeneity and Collision predictions
☆12Updated 5 months ago
Alternatives and similar repositories for ARF
Users that are interested in ARF are comparing it to the libraries listed below
Sorting:
- A list of alternative splicing analysis resources☆46Updated 9 months ago
- Tutorial Website☆61Updated 4 years ago
- This is the Gviz development repository. Gviz plots data and annotation information along genomic coordinates.☆88Updated 11 months ago
- Transcriptomics Visualization R package.☆74Updated 8 months ago
- An elegant package to visualize gene structures☆82Updated 2 years ago
- An R package to Identify, Annoatate and Visialize Isoform Switches with Functional Consequences (from RNA-seq data)☆120Updated 3 weeks ago
- A pipeline to process m6A-seq data and down stream analysis.☆45Updated 5 years ago
- From RNA-seq raw reads to enriched pathways by DEGs☆33Updated last year
- release version☆57Updated 3 years ago
- Dynamics analysis of Alternative PolyAdenylation from RNA-seq☆63Updated 2 years ago
- Scripts for paper entitled "Limits in the detection of m6A changes using MeRIP/m6A-seq☆51Updated 5 years ago
- A Perl/R pipeline for plotting metagenes☆37Updated 4 years ago
- ☆88Updated last year
- A bioconductor package with minimalist design for drawing elegant tracks or lollipop plot☆74Updated last month
- This RNAseq data analysis tutorial is created for educational purpose☆32Updated 3 months ago
- A step-by-step tutorial for Weighted correlation network analysis (WGCNA)☆71Updated 3 years ago
- A modular, containerized pipeline for ATAC-seq data processing☆61Updated 3 months ago
- ☆63Updated last year
- Tutorial for AMSI BioInfoSummer 2018☆30Updated 7 years ago
- RepEnrich2 is an updated method to estimate repetitive element enrichment using high-throughput sequencing data.☆41Updated 3 years ago
- Links to ATAC-seq analysis tools☆74Updated 4 years ago
- HMMRATAC peak caller for ATAC-seq data☆99Updated last year
- An R interface to the MEME Suite☆54Updated 6 months ago
- Basic workflow for ATAC-seq analysis☆92Updated last year
- Code and analysis pipeline for Smart-seq3 (Hagemann-Jensen et al. 2020).☆56Updated 4 years ago
- Integrating Ribo-SEQ Upstream and Downstream Analysis☆11Updated last year
- perl cworld module and collection of utility/analysis scripts for C data (3C, 4C, 5C, Hi-C)☆67Updated 6 years ago
- ☆50Updated 7 years ago
- Visualizing transcript structure and annotation using ggplot2☆163Updated last year
- Integrative pathway enrichment analysis of multivariate omics data☆117Updated 5 months ago