Detection of differential translated genes using Ribo-seq
☆17Apr 10, 2021Updated 5 years ago
Alternatives and similar repositories for translational_regulation
Users that are interested in translational_regulation are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- uORF-Tools are a workflow and a collection of tools for the analysis of 'Upstream Open Reading Frames' (short uORFs)☆13Jul 30, 2019Updated 7 years ago
- Analysis and Visualization of Ribosome Profiling Data☆32Aug 29, 2025Updated last year
- Riborex: Fast and flexible identification of differential translation from Ribo-seq data☆12Apr 9, 2021Updated 5 years ago
- Analysis and Visualization of Ribosome Profiling Data☆12Dec 14, 2019Updated 6 years ago
- Pipeline for Ribosome Profiling Data☆19Updated this week
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- optimization of ribosome P-site positioning in ribosome profiling data☆63Feb 24, 2025Updated last year
- Pipeline for Quality Control of Ribo-Seq data, selection of P-site offsets, and codon usage statistics.☆20Aug 9, 2023Updated 3 years ago
- ORF Quantification pipeline for Alternative Splicing☆16May 11, 2021Updated 5 years ago
- Integrating zingeR with ZINB-WaVE weights☆26Feb 15, 2018Updated 8 years ago
- A Sliding Window Approach to Identify Differentially Methylated Regions Based on Whole Genome Bisulfite Sequencing☆14May 22, 2023Updated 3 years ago
- ☆14Dec 16, 2022Updated 3 years ago
- methods for orphan gene prediction paper optimization☆25Dec 24, 2021Updated 4 years ago
- Shiny app for the analysis of single cell data☆26Jun 20, 2026Updated 2 months ago
- Analyses of Ribo-seq rRNA fragments for Differential Ribosome Heterogeneity and Collision predictions☆16Aug 5, 2026Updated last month
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Reproducible GSEA Benchmarking☆14May 14, 2026Updated 3 months ago
- An alignment and analysis pipeline for Ribosome Profiling and RNA-seq data☆13Jul 2, 2024Updated 2 years ago
- public production version of sequin to share with the public☆11Jun 12, 2026Updated 2 months ago
- R package for metabolic enzyme enrichment anaylsis☆14Oct 24, 2025Updated 10 months ago
- Ribo-seq TIS Hunter, predicting translation initiation sites and ORFs using riboseq data☆54Oct 21, 2025Updated 10 months ago
- A copy of RiboTaper v1.2☆10Mar 14, 2021Updated 5 years ago
- Bioconductor package for analysis of methylation data from Illumina's Infinium HumanMethylation arrays.☆15Mar 3, 2025Updated last year
- Combined clonality and transcriptome scRNAseq clustering method☆11Dec 3, 2022Updated 3 years ago
- omniCLIP is a CLIP-Seq peak caller☆16Nov 14, 2020Updated 5 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Nextflow pipeline to extend reference annotation with nanopore reads, classify novel genes (mRNAs vs lncRNAs).☆17Aug 26, 2026Updated last week
- NATMI: Network Analysis Toolkit for the Multicellular Interactions☆36Apr 13, 2021Updated 5 years ago
- A comprehensive analysis tool for Ribo-seq and small RNA-seq data☆10Jun 22, 2020Updated 6 years ago
- Statistical Analysis of High Dimensional Data☆15Jul 29, 2026Updated last month
- The Model SEED is a tool for building, curating, and analyzing gonome-scale metabolic models. Visit the Model SEED homepage for installat…☆21Jan 3, 2013Updated 13 years ago
- Analysis steps to calculate RNA Velocity in Bulk RNA-Seq samples. Step by Step Guide.☆17Jan 7, 2020Updated 6 years ago
- ☆24Apr 14, 2022Updated 4 years ago
- ☆12Mar 22, 2023Updated 3 years ago
- ☆13Jan 8, 2026Updated 7 months ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- ☆22Sep 8, 2023Updated 2 years ago
- ☆12Apr 28, 2026Updated 4 months ago
- Define regions in the genome☆33Mar 3, 2022Updated 4 years ago
- Signaling Pathway Visualizer☆10Jun 22, 2019Updated 7 years ago
- COnstraint-based Reconstruction and Analysis (COBRA) of metabolic networks in R☆18May 6, 2026Updated 4 months ago
- The text for https://www.tiki-toki.com/timeline/entry/1753034/A-History-of-Research-Ethics/☆19Nov 1, 2023Updated 2 years ago
- Instructions and analysis scripts for single cell Higher Order Testing (scHOT)☆10Oct 7, 2020Updated 5 years ago