zhejilab / RibORFLinks
Identifying genome-wide translated open reading frames using ribosome profiling
☆24Updated 2 years ago
Alternatives and similar repositories for RibORF
Users that are interested in RibORF are comparing it to the libraries listed below
Sorting:
- single-cell-Isoform-Sequencing-Analysis-Tools: New and powerful tools brings single-cell RNA sequencing to the Isoform level and single m…☆26Updated last year
- RNA editing quantification in deep transcriptome data☆16Updated 5 months ago
- A list of alternative splicing analysis resources☆46Updated 9 months ago
- ☆15Updated 3 years ago
- A tool for accurately detecting actively translating ORFs from Ribo-seq data☆39Updated 11 months ago
- ☆20Updated 6 years ago
- A R script to perform clustering of gene expression time-series RNA-seq data with Mfuzz.☆23Updated 6 years ago
- REDItools are python scripts to investigate RNA editing at genomic scale.☆69Updated 5 months ago
- direct comparison of circular and linear RNA expression☆23Updated 4 years ago
- A statistical tool to detect differential alternative splicing events using single-cell RNA-seq☆22Updated 2 years ago
- An R package to process and analyze transcriptomic data☆18Updated 6 months ago
- A Python3-base pipeline for translated circular RNA(circRNA) identification☆19Updated 3 months ago
- EasyFuse is a pipeline for accurate fusion gene detection from RNA-seq data.☆62Updated 3 months ago
- Bioinformatic tool for Splice site Strength Estimation using RNA-seq☆20Updated 5 months ago
- SEASTAR - Systematic Evaluation of Alternative transcription STArt site in RNA☆14Updated 7 years ago
- An R package for Splice-aware quantification of translation using Ribo-seq data☆19Updated 2 years ago
- Ribo-seq TIS Hunter, predicting translation initiation sites and ORFs using riboseq data☆43Updated 2 months ago
- RiboPlotR package for Ribo-plot☆15Updated 7 months ago
- A Perl/R pipeline for plotting metagenes☆37Updated 4 years ago
- CLIP-seq Analysis of Multi-mapped reads☆31Updated 4 years ago
- Tutorial Website☆62Updated 4 years ago
- Model-based analysis of APA using 3' end-linked reads☆11Updated 4 years ago
- ☆23Updated 4 years ago
- Small non-coding RNA annotation Pipeline Optimized for rRNA- and tRNA-Derived Small RNAs☆54Updated this week
- RADAR is devised to detect and visualize all possible twelve-types of RNA editing events from RNA-seq datasets.☆20Updated 4 months ago
- APAlyzer is a toolkit for bioinformatic analysis of alternative polyadenylation (APA) events using RNA sequencing data. Our main approach…☆12Updated last year
- RepEnrich2 is an updated method to estimate repetitive element enrichment using high-throughput sequencing data.☆41Updated 3 years ago
- Public repository containing research code for the TCGA PanCanAtlas Splicing project☆42Updated 4 years ago
- Demultiplexes a fastq.☆48Updated 5 years ago
- Process m6A/MeRIP-seq data in a single or batch job mode☆21Updated 5 years ago