zhejilab / RibORFLinks
Identifying genome-wide translated open reading frames using ribosome profiling
☆23Updated 2 years ago
Alternatives and similar repositories for RibORF
Users that are interested in RibORF are comparing it to the libraries listed below
Sorting:
- single-cell-Isoform-Sequencing-Analysis-Tools: New and powerful tools brings single-cell RNA sequencing to the Isoform level and single m…☆25Updated last year
- ☆15Updated 3 years ago
- CLIP-seq Analysis of Multi-mapped reads☆31Updated 4 years ago
- RepEnrich2 is an updated method to estimate repetitive element enrichment using high-throughput sequencing data.☆40Updated 3 years ago
- A statistical tool to detect differential alternative splicing events using single-cell RNA-seq☆22Updated 2 years ago
- RNA editing quantification in deep transcriptome data☆15Updated last month
- EasyFuse is a pipeline for accurate fusion gene detection from RNA-seq data.☆61Updated 9 months ago
- RADAR is devised to detect and visualize all possible twelve-types of RNA editing events from RNA-seq datasets.☆20Updated last week
- A list of alternative splicing analysis resources☆46Updated 5 months ago
- optimization of ribosome P-site positioning in ribosome profiling data☆53Updated 6 months ago
- A Perl/R pipeline for plotting metagenes☆37Updated 3 years ago
- A Python3-base pipeline for translated circular RNA(circRNA) identification☆17Updated last week
- A continually expanding collection of RNA-seq tools☆51Updated 11 months ago
- Bioinformatic tool for Splice site Strength Estimation using RNA-seq☆18Updated last month
- direct comparison of circular and linear RNA expression☆22Updated 4 years ago
- A tool for accurately detecting actively translating ORFs from Ribo-seq data☆39Updated 7 months ago
- REDItools are python scripts to investigate RNA editing at genomic scale.☆68Updated last month
- A R script to perform clustering of gene expression time-series RNA-seq data with Mfuzz.☆22Updated 6 years ago
- Ribo-seq TIS Hunter, predicting translation initiation sites and ORFs using riboseq data☆43Updated 9 months ago
- An R package for Splice-aware quantification of translation using Ribo-seq data☆19Updated last year
- Full-length transcriptome splicing and mutation analysis☆84Updated last year
- ☆20Updated 5 years ago
- Estimate locus specific human LINE-1 expression.☆38Updated 2 years ago
- Tutorial Website☆59Updated 4 years ago
- ☆58Updated last month
- Data of genome annotation from full-stack ChromHMM model trained with 1032 datasets from 127 reference epigenomes☆37Updated last year
- A script to make downloading of SRA/GEO data easier☆31Updated last year
- ☆23Updated 4 years ago
- Demultiplexes a fastq.☆47Updated 4 years ago
- a versatile and flexible pipeline for analysing different variants of ChIA-PET data☆34Updated 9 months ago