zhpn1024 / ribotishLinks
Ribo-seq TIS Hunter, predicting translation initiation sites and ORFs using riboseq data
☆43Updated 8 months ago
Alternatives and similar repositories for ribotish
Users that are interested in ribotish are comparing it to the libraries listed below
Sorting:
- REDItools are python scripts to investigate RNA editing at genomic scale.☆68Updated last month
- Full-length transcriptome splicing and mutation analysis☆84Updated last year
- optimization of ribosome P-site positioning in ribosome profiling data☆52Updated 5 months ago
- ☆58Updated last month
- A tool for accurately detecting actively translating ORFs from Ribo-seq data☆39Updated 6 months ago
- A list of alternative splicing analysis resources☆45Updated 4 months ago
- Convert Counts to Fragments per Kilobase of Transcript per Million (FPKM)☆62Updated 4 years ago
- Workflows for processing RNA data for germline short variant discovery with GATK v4 and related tools☆79Updated 3 years ago
- A tool for the calculation of RNA-editing index for RNA seq data☆43Updated last year
- Single cell Nanopore sequencing data for Genotype and Phenotype☆54Updated 3 months ago
- release version☆54Updated 3 years ago
- EasyFuse is a pipeline for accurate fusion gene detection from RNA-seq data.☆60Updated 8 months ago
- ☆50Updated 6 years ago
- A Perl/R pipeline for plotting metagenes☆37Updated 3 years ago
- From RNA-seq raw reads to enriched pathways by DEGs☆32Updated last year
- HemTools: a collection of NGS pipelines and bioinformatic analyses☆72Updated 3 weeks ago
- Estimation of Promoter Activity from RNA-Seq data☆53Updated last month
- Dynamics analysis of Alternative PolyAdenylation from RNA-seq☆61Updated last year
- A method for circular DNA detection based on probabilistic mapping of ultrashort reads☆65Updated last year
- Quantification of transposable element expression using RNA-seq☆74Updated last year
- Estimate locus specific human LINE-1 expression.☆36Updated 2 years ago
- An R package to Identify, Annoatate and Visialize Isoform Switches with Functional Consequences (from RNA-seq data)☆116Updated 6 months ago
- RepEnrich2 is an updated method to estimate repetitive element enrichment using high-throughput sequencing data.☆40Updated 3 years ago
- Tutorial Website☆59Updated 4 years ago
- perl cworld module and collection of utility/analysis scripts for C data (3C, 4C, 5C, Hi-C)☆67Updated 6 years ago
- Pipeline for Somatic Variant Calling with WES and WGS data☆23Updated last year
- A bioconductor package with minimalist design for drawing elegant tracks or lollipop plot☆72Updated 2 months ago
- Links to ATAC-seq analysis tools☆69Updated 3 years ago
- tools to find circRNAs in RNA-seq data☆44Updated 7 years ago
- Identifying genome-wide translated open reading frames using ribosome profiling☆23Updated 2 years ago