Two methods for mapping and visualizing associated data on phylogeny using ggtree
☆12Dec 25, 2018Updated 7 years ago
Alternatives and similar repositories for plotting_tree_with_data
Users that are interested in plotting_tree_with_data are comparing it to the libraries listed below
Sorting:
- Using ggtree to Visualize Data on Tree-Like Structure☆25Mar 6, 2020Updated 6 years ago
- Useful bash one-liners for bioinformatics.☆10Jun 26, 2017Updated 8 years ago
- Mitochondrial Solar Plot☆25Feb 25, 2017Updated 9 years ago
- Genomic plot in trellis layout☆43Jan 30, 2026Updated last month
- ggtree version of plotTree.R☆18Nov 12, 2018Updated 7 years ago
- Read, write and format Excel files using R☆15Sep 29, 2025Updated 5 months ago
- Python project to validate a phylogenetic fitted models is within the limits of inference☆19Mar 2, 2026Updated 2 weeks ago
- TR annotation tool VAMPIRE☆18Mar 2, 2026Updated 2 weeks ago
- An R package for detecting and analysing climate windows☆14Feb 13, 2026Updated last month
- Pipelines in genomics☆23Apr 7, 2022Updated 3 years ago
- Rapid identification of Staphylococcus aureus agr locus type and agr operon variants.☆10Jan 6, 2023Updated 3 years ago
- design common and specific primer for LAMP using the whole genome☆15Feb 12, 2026Updated last month
- Metagenomics/viromics pipeline that focuses on automation, user-friendliness and a clear audit trail. Jovian aims to empower classical bi…☆18Sep 1, 2023Updated 2 years ago
- Package to Draw NLR Domain Architecture using NLRtracker Output☆16Jul 30, 2021Updated 4 years ago
- A tool to easily create informative genomic feature plots☆17Dec 26, 2022Updated 3 years ago
- Archived - please see updated sccmec tool at link below☆13Aug 30, 2024Updated last year
- Build Annotation package by using information from KEGG, NCBI, Ensembl☆15May 4, 2023Updated 2 years ago
- ☆10Apr 30, 2019Updated 6 years ago
- ☆29Apr 20, 2019Updated 6 years ago
- A library to create lore plots (logistic regression of the prevalence of a categorical variable in function of a continuous feature)☆18Mar 1, 2026Updated 2 weeks ago
- Principal component analysis plugin for D3.js☆10Aug 20, 2017Updated 8 years ago
- ☆13Nov 15, 2017Updated 8 years ago
- Toolkit to convert the output of common variant calling programs to VCF☆23Dec 7, 2022Updated 3 years ago
- Chromosome Scale Assembler: A high-throughput chromosome scale genome assembly pipeline for vertebrate genomes☆10Oct 16, 2024Updated last year
- 16S pipeline using qiime2 created with snakemake☆12Jan 2, 2026Updated 2 months ago
- R package to guess coordinates from a scatter plot (as an image)☆13Nov 27, 2018Updated 7 years ago
- Define regions in the genome☆33Mar 3, 2022Updated 4 years ago
- The Systems Biology Ontology (SBO) is a set of controlled, relational vocabularies of terms commonly used in Systems Biology, and in part…☆11May 16, 2023Updated 2 years ago
- Examples of application of comparative methods in R☆60Oct 3, 2022Updated 3 years ago
- Annotate Olfactory receptor CDS from genome☆11Apr 29, 2023Updated 2 years ago
- ARCHIVED: this has been folded into the owlapi☆11Oct 27, 2020Updated 5 years ago
- Visualization methods for omics dataset quality control☆10Jul 17, 2025Updated 8 months ago
- Collection of R functions used in the Hochwagen Lab☆12Aug 4, 2025Updated 7 months ago
- Twenty Years of R (Presentation)☆14Jan 5, 2021Updated 5 years ago
- polysat 1.7: tools for polyploid microsatellite analysis☆12Dec 20, 2024Updated last year
- This is an integration layer that sits between Whoosh and Django so that full-text searching can be not only possible within any Django p…☆22Sep 1, 2017Updated 8 years ago
- Introduction to single cell RNAseq data analysis and interpretation course work provided by Harvard Informatics Team.☆17Nov 20, 2018Updated 7 years ago
- Code for RNA-seq gene coexpression analysis☆10Dec 23, 2021Updated 4 years ago
- Riborex: Fast and flexible identification of differential translation from Ribo-seq data☆12Apr 9, 2021Updated 4 years ago