Two methods for mapping and visualizing associated data on phylogeny using ggtree
☆12Dec 25, 2018Updated 7 years ago
Alternatives and similar repositories for plotting_tree_with_data
Users that are interested in plotting_tree_with_data are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Using ggtree to Visualize Data on Tree-Like Structure☆25Mar 6, 2020Updated 6 years ago
- Useful bash one-liners for bioinformatics.☆10Jun 26, 2017Updated 9 years ago
- Genomic plot in trellis layout☆43Jan 30, 2026Updated 7 months ago
- ggtree version of plotTree.R☆18Nov 12, 2018Updated 7 years ago
- An R package for detecting and analysing climate windows☆14Jun 13, 2026Updated 2 months ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Read, write and format Excel files using R☆15Sep 29, 2025Updated 11 months ago
- Pipelines in genomics☆23Jun 17, 2026Updated 2 months ago
- Rapid identification of Staphylococcus aureus agr locus type and agr operon variants.☆14Jan 6, 2023Updated 3 years ago
- design common and specific primer for LAMP using the whole genome☆15Feb 12, 2026Updated 6 months ago
- Mitochondrial Solar Plot☆25Feb 25, 2017Updated 9 years ago
- Code repository accompanying the manuscript, Symbiont loss and gain, rather than co-diversification shapes honeybee gut microbiota divers…☆15Feb 21, 2025Updated last year
- An et al. Nature Communications 2023☆15Jan 19, 2023Updated 3 years ago
- Metagenomics/viromics pipeline that focuses on automation, user-friendliness and a clear audit trail. Jovian aims to empower classical bi…☆19Sep 1, 2023Updated 2 years ago
- Build Annotation package by using information from KEGG, NCBI, Ensembl☆16May 4, 2023Updated 3 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Annotate Olfactory receptor CDS from genome☆11Apr 29, 2023Updated 3 years ago
- Archived - please see updated sccmec tool at link below☆13Aug 30, 2024Updated 2 years ago
- Pipelines for NGS, imputation, gwas, ...☆30Dec 18, 2019Updated 6 years ago
- ☆29Apr 20, 2019Updated 7 years ago
- ☆10Apr 30, 2019Updated 7 years ago
- TR annotation tool VAMPIRE☆19Jun 22, 2026Updated 2 months ago
- Package to Draw NLR Domain Architecture using NLRtracker Output☆16Jul 30, 2021Updated 5 years ago
- A library to create lore plots (logistic regression of the prevalence of a categorical variable in function of a continuous feature)☆18Aug 1, 2026Updated 3 weeks ago
- Pipeline for genome scaffolding by modelling distributions of HiC pairs☆12Dec 7, 2022Updated 3 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆13Nov 15, 2017Updated 8 years ago
- Define regions in the genome☆33Mar 3, 2022Updated 4 years ago
- Toolkit to convert the output of common variant calling programs to VCF☆23Dec 7, 2022Updated 3 years ago
- Principal component analysis plugin for D3.js☆10Aug 20, 2017Updated 9 years ago
- Chromosome Scale Assembler: A high-throughput chromosome scale genome assembly pipeline for vertebrate genomes☆10Oct 16, 2024Updated last year
- R package to guess coordinates from a scatter plot (as an image)☆13Nov 27, 2018Updated 7 years ago
- 16S pipeline using qiime2 created with snakemake☆12Aug 21, 2026Updated last week
- Python project to validate a phylogenetic fitted models is within the limits of inference☆20Apr 13, 2026Updated 4 months ago
- ☆10Feb 14, 2022Updated 4 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Examples of application of comparative methods in R☆60Oct 3, 2022Updated 3 years ago
- AnceTran2.0: R package for transcriptome evolution analysis based on RNA-seq expression data or ChIP-seq TF-binding data☆12May 19, 2019Updated 7 years ago
- The Systems Biology Ontology (SBO) is a set of controlled, relational vocabularies of terms commonly used in Systems Biology, and in part…☆12May 16, 2023Updated 3 years ago
- ARCHIVED: this has been folded into the owlapi☆11Oct 27, 2020Updated 5 years ago
- Code for TAD_SV project☆11Mar 16, 2022Updated 4 years ago
- Visualization methods for omics dataset quality control☆10Jun 24, 2026Updated 2 months ago
- uORF-Tools are a workflow and a collection of tools for the analysis of 'Upstream Open Reading Frames' (short uORFs)☆13Jul 30, 2019Updated 7 years ago