ProtFlow Implementation of the RiffDiff pipeline to design enzymes from theozymes.
☆97Jul 31, 2026Updated 3 weeks ago
Alternatives and similar repositories for riff_diff_protflow
Users that are interested in riff_diff_protflow are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A Python package to manage protein design workflows on computing clusters and local machines. Documentation can be found here: https://pr…☆43Aug 17, 2026Updated last week
- All-Atom (Including Hydrogen!) Ligand-Conditioned Protein Sequence Design & Sidechain Packing GNN☆83Jul 14, 2026Updated last month
- ☆86Mar 23, 2026Updated 5 months ago
- PLACER is graph neural network for local prediction of protein-ligand conformational ensembles.☆263Nov 5, 2025Updated 9 months ago
- code and source data for de novo design of Kemp elimination paper☆26Sep 18, 2025Updated 11 months ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Inference code for RFdiffusion2☆440Apr 3, 2026Updated 4 months ago
- ☆36Feb 4, 2026Updated 6 months ago
- ☆259Feb 12, 2026Updated 6 months ago
- Central repository for biomolecular foundation models with shared trainers and pipeline components☆946Updated this week
- ☆15May 18, 2026Updated 3 months ago
- Fold Conditioned protein design pipeline based on AF2Multimer Hallucination☆55Jun 22, 2026Updated 2 months ago
- ☆627Feb 6, 2025Updated last year
- Potts model-based protein sequence design☆111Jul 1, 2026Updated last month
- Neural Iterative Selection-Expansion using LigandMPNN/LASErMPNN and Boltz-2x☆66Aug 11, 2026Updated 2 weeks ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- design by evolutionary algorithm☆23Aug 23, 2026Updated last week
- HalluDesign, a hallucination-driven all-atom framework for the iterative co-optimization and co-design of protein sequences and structure…☆87Jul 23, 2026Updated last month
- Fast indexing and search of discontinuous motifs in protein structures☆213Jul 10, 2026Updated last month
- Sidechain conditioning and modeling for full-atom protein sequence design☆149Nov 11, 2025Updated 9 months ago
- Active Learning-Assisted Directed Evolution for Protein Engineering☆85Oct 24, 2025Updated 10 months ago
- ☆147Jun 16, 2026Updated 2 months ago
- A generalized computational framework for biomolecular modeling.☆443Aug 20, 2026Updated last week
- ☆101Jul 24, 2026Updated last month
- ☆78May 4, 2026Updated 3 months ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations☆116Apr 15, 2026Updated 4 months ago
- HBDesigner is an algorithm that designs highly-connected hydrogen bonding networks that fit the requested design constraints onto an inpu…☆18Updated this week
- Structure prediction and design of proteins with noncanonical amino acids☆146Feb 1, 2026Updated 6 months ago
- ☆73Apr 8, 2025Updated last year
- ☆77May 18, 2026Updated 3 months ago
- Efficient manipulation of protein structures in Python☆68Jun 16, 2026Updated 2 months ago
- Generative model for protein binder design for protein and small molecule targets. Combines a pretrained flow-based generative model (bui…☆420Updated this week
- Diffusion-based all-atom protein generative model.☆238Aug 27, 2025Updated last year
- ☆74Feb 13, 2026Updated 6 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Official repository for DiffPepBuilder and DiffPepDock tools☆131Oct 24, 2025Updated 10 months ago
- Official repository of "ODesign: A World Model for Biomolecular Interaction Design"☆336Jul 1, 2026Updated last month
- Code for the DISCO model: General Multimodal Protein Design Enables DNA-Encoding of Chemistry☆215May 13, 2026Updated 3 months ago
- User friendly and accurate binder design pipeline☆1,196Aug 12, 2026Updated 2 weeks ago
- composite-objective protein design☆362Aug 11, 2026Updated 2 weeks ago
- Utility for building inverse rotamer assemblies out of a Rosetta matcher/enzdes constraint file.☆29Mar 8, 2025Updated last year
- Design scripts corresponding to "Computational design of sequence-specific DNA-binding proteins."☆22Oct 23, 2025Updated 10 months ago