Alternatives and similar repositories for iNNterfaceDesign

Users that are interested in iNNterfaceDesign are comparing it to the libraries listed below

• Furman-Lab / PatchMAN
  ☆27Updated last month
• LPDI-EPFL / FunFolDesData
  Rosetta FunFolDes – a general framework for the computational design of functional proteins.
  ☆21Updated 6 years ago
• dtischer / trdesign-motif
  Codebase for our preprint using trRosetta to design proteins with discontinuous functional sites, found here: https://www.biorxiv.org/con…
  ☆16Updated 4 years ago
• matteoferla / pyrosetta-help
  Some scripts that I keep using over and over.
  ☆21Updated 7 months ago
• tommyhuangthu / EvoEF2
  Physical energy function for protein sequence design
  ☆36Updated 2 years ago
• ohuelab / Solubility_AfDesign
  Controlling the usage of hydrophobic residues on AfDesign for binder peptide design with AlphaFold hallucination protocol
  ☆33Updated 2 years ago
• sokrypton / roscon2024
  Tutorial files
  ☆12Updated last year
• cl666666 / GVP-MSA
  ☆14Updated 2 years ago
• ohuelab / ColabFold-cycpep-dock
  Making Protein folding accessible to all!
  ☆25Updated 2 years ago
• violet-sto / Bridge-IF
  Official implementation of NeurIPS'24 paper "Bridge-IF: Learning Inverse Protein Folding with Markov Bridges"
  ☆18Updated 10 months ago
• ohuelab / ColabDesign-cyclic-binder
  ☆37Updated 2 years ago
• KhondamirRustamov / FoldCraft
  Fold Conditioned protein design pipeline based on AF2Multimer Hallucination
  ☆49Updated 2 months ago
• wallnerlab / AFsample2
  Modelling protein conformational landscape with Alphafold
  ☆54Updated 5 months ago
• samgoldman97 / enzyme-datasets
  Enzyme datasets used to benchmark enzyme-substrate promiscuity models
  ☆40Updated 4 years ago
• csi-greifflab / developability_profiling
  ☆28Updated 5 months ago
• bwicky / oligomer_hallucination
  ☆37Updated 2 years ago
• jaaamessszzz / BindingSitesFromFragments
  De novo design of small molecule binding sites into proteins
  ☆12Updated 4 years ago
• LongxingCao / pymol_scripts
  bakerlab pymol scripts
  ☆26Updated 6 years ago
• oxpig / kasearch
  KA-Search: Rapid and exhaustive sequence identity search of known antibodies
  ☆23Updated last year
• johnnytam100 / AlphaCutter
  This repository contains the AlphaCutter.py for the removal of non-globular regions from predicted protein structures.
  ☆16Updated 2 years ago
• KULL-Centre / _2023_Blaabjerg_SSEmb
  ☆40Updated last year
• issararab / PEvoLM
  Protein Sequence Evolutionary Information Language Model
  ☆13Updated 2 years ago
• Junjie-Zhu / IDPFold
  Precise Generation of Conformational Ensembles for Intrinsically Disordered Proteins with IDPFold
  ☆26Updated last year
• sirius777coder / GPDL
  Generative diverse protein backbones by protein language model
  ☆34Updated 3 months ago
• amyguo1997 / dynamic_protein_design
  Code for deep learning guided design of dynamic proteins
  ☆32Updated last year
• PKUliujl / GeoSeqBuilder
  ☆32Updated last year
• PeptoneLtd / proteinmpnn_ddg
  Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.
  ☆61Updated 8 months ago
• mjendrusch / salad
  protein structure generation with sparse all-atom denoising models
  ☆59Updated last month
• Lailabcode / DeepViscosity
  DeepViscosity is a deep learning ANN model developed to predict high concentrated monoclonal antibody viscosity classes (Low <= 20cps, Hi…
  ☆20Updated 6 months ago
• RosettaCommons / FvHallucinator
  ☆28Updated 3 years ago