nrbennet / dl_binder_design

Related projects: ⓘ

• dauparas / LigandMPNN
  ☆205Updated 3 months ago
• baker-laboratory / rf_diffusion_all_atom
  Public RFDiffusionAA repo
  ☆280Updated 2 months ago
• bjornwallner / DockQ
  DockQ is a single continuous quality measure for Protein, Nucleic Acids and Small Molecule Docking Models
  ☆205Updated 3 weeks ago
• RosettaCommons / RFDesign
  Protein hallucination and inpainting with RoseTTAFold
  ☆234Updated last year
• RosettaCommons / protein_generator
  Joint sequence and structure generation with RoseTTAFold sequence space diffusion
  ☆210Updated 8 months ago
• zrqiao / NeuralPLexer
  NeuralPLexer: State-specific protein-ligand complex structure prediction with a multi-scale deep generative model
  ☆254Updated 4 months ago
• Graylab / IgFold
  Fast, accurate antibody structure prediction from deep learning on massive set of natural antibodies
  ☆319Updated last year
• patrickbryant1 / Umol
  Protein-ligand structure prediction
  ☆183Updated last month
• uw-ipd / RoseTTAFold2
  ☆161Updated 3 weeks ago
• guyujun / pyrosetta-basic
  ☆140Updated 2 years ago
• brianhie / efficient-evolution
  Efficient evolution from protein language models
  ☆167Updated last year
• RosettaCommons / DeepAb
  Deep learning models and structure realization scripts for the DeepAb antibody structure prediction method.
  ☆142Updated last year
• fhalab / MLDE
  A machine-learning package for navigating combinatorial protein fitness landscapes.
  ☆118Updated 2 years ago
• hefeda / design_tools
  A compilation of deep learning methods for protein design
  ☆94Updated last year
• Merck / BioPhi
  BioPhi is an open-source antibody design platform. It features methods for automated antibody humanization (Sapiens), humanness evaluatio…
  ☆141Updated this week
• FreshAirTonight / af2complex
  Predicting direct protein-protein interactions with AlphaFold deep learning neural network models.
  ☆147Updated last week
• oxpig / ImmuneBuilder
  Predict the structure of immune receptor proteins
  ☆109Updated 2 months ago
• JeffSHF / ColabDock
  Code for ColabDock paper
  ☆115Updated last month
• gjoni / trDesign
  trRosetta for protein design
  ☆171Updated 3 years ago
• adaptyvbio / ProteinFlow
  Versatile computational pipeline for processing protein structure data for deep learning applications.
  ☆214Updated 7 months ago
• rifdock / rifdock
  Rifdock Library for Conformational Search
  ☆129Updated 4 months ago
• HWaymentSteele / AF_Cluster
  Predict multiple protein conformations using sequence clustering and AlphaFold2.
  ☆128Updated last week
• luwei0917 / DynamicBind
  repo for DynamicBind: Predicting ligand-specific protein-ligand complex structure with a deep equivariant generative model
  ☆182Updated 4 months ago
• uw-ipd / RoseTTAFold2NA
  RoseTTAFold2 protein/nucleic acid complex prediction
  ☆319Updated 3 months ago
• biolists / folding_tools
  A collection of *fold* tools
  ☆281Updated 2 months ago
• luost26 / diffab
  ✌🏻 Antigen-Specific Antibody Design and Optimization with Diffusion-Based Generative Models for Protein Structures (NeurIPS 2022)
  ☆268Updated last year
• KosinskiLab / AlphaPulldown
  ☆195Updated this week
• phbradley / alphafold_finetune
  Python code for fine-tuning AlphaFold to perform protein-peptide binding predictions
  ☆132Updated 8 months ago
• LPDI-EPFL / masif_seed
  Masif seed paper repository
  ☆129Updated last year
• oxpig / ANARCI
  Antibody Numbering and Antigen Receptor ClassIfication
  ☆178Updated 3 months ago