Implementation of Protein Invariant Point Packer (PIPPack)
☆37May 28, 2024Updated 2 years ago
Alternatives and similar repositories for PIPPack
Users that are interested in PIPPack are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Structure-conditioned masked language modeling for protein sequence design☆74Jan 31, 2024Updated 2 years ago
- This repository contains code for the paper: "Tertiary motifs as building blocks for the design of protein-binding peptides"☆20Jan 15, 2024Updated 2 years ago
- TMol - Rosetta on the GPU☆92Updated this week
- De Novo Protein Design by Equivariantly Diffusing Oriented Residue Clouds☆189Apr 21, 2024Updated 2 years ago
- Code for our paper "Protein sequence design with a learned potential"☆34Aug 5, 2021Updated 5 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆102Jul 24, 2026Updated last month
- ☆11Mar 31, 2026Updated 5 months ago
- ☆64Sep 14, 2023Updated 3 years ago
- ☆11Apr 25, 2021Updated 5 years ago
- ☆47Sep 16, 2024Updated 2 years ago
- Implementation of DiffPack: A Torsional Diffusion Model for Autoregressive Protein Side-Chain Packing☆92Dec 4, 2023Updated 2 years ago
- ☆38Dec 21, 2023Updated 2 years ago
- LIVIA (Local Interaction VIsualization and Analysis) — Analyze and visualize protein interaction interfaces from structure predictions. B…☆26Updated this week
- ☆11Apr 21, 2023Updated 3 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆18Mar 13, 2024Updated 2 years ago
- Python package for site-directed spin labeling of proteins☆14Jun 9, 2026Updated 3 months ago
- Building more accurate protein structures from backbone torsion angles☆16Mar 21, 2025Updated last year
- De novo design of small molecule binding sites into proteins☆11Apr 14, 2021Updated 5 years ago
- protein backbone refinement☆16Sep 12, 2024Updated 2 years ago
- LatentDE: Latent-based Directed Evolution for Protein Sequence Design☆38Apr 2, 2025Updated last year
- ☆11Aug 5, 2020Updated 6 years ago
- Diffusion-based all-atom protein generative model.☆239Aug 27, 2025Updated last year
- Code for our paper "Protein sequence design with a learned potential"☆81Sep 8, 2023Updated 3 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Metrics to evaluate distributional coverage of generative models of protein structures.☆21Aug 13, 2025Updated last year
- Graph Learning of INTER-protein contacts☆11Feb 20, 2022Updated 4 years ago
- ☆146Jun 3, 2025Updated last year
- ☆260Jul 31, 2024Updated 2 years ago
- Implementation of the DDPM + IPA (invariant point attention) for protein generation, as outlined in the paper "Protein Structure and Sequ…☆89Jul 25, 2022Updated 4 years ago
- Scripts and data deposition for de novo heterodimers manuscript☆11Dec 15, 2018Updated 7 years ago
- Display PackedPose objects, Pose objects, or PDB files within a Jupyter notebook and Google Colab☆11Aug 29, 2026Updated 2 weeks ago
- Tutorial files☆12Aug 7, 2024Updated 2 years ago
- Protein Sequence Design with Deep Learning and Tooling like Monte Carlo Sampling and Analysis☆62Oct 28, 2025Updated 10 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- protein docking stuff☆57Apr 2, 2026Updated 5 months ago
- Database of Interacting Protein Structures (DIPS)☆106Jan 26, 2024Updated 2 years ago
- Protein generative model conditioned on Gene Ontology terms☆34Jul 17, 2022Updated 4 years ago
- Versatile computational pipeline for processing protein structure data for deep learning applications.☆282Feb 14, 2024Updated 2 years ago
- Code for "A Deep Learning Framework for Flexible Docking and Design"☆17Sep 29, 2022Updated 3 years ago
- ☆10Apr 1, 2022Updated 4 years ago
- Protein Design with Guided Discrete Diffusion☆144Feb 21, 2024Updated 2 years ago