LPDI-EPFL / topobuilderLinks
Parametric Building of de novo Functional Topologies
☆44Updated 3 years ago
Alternatives and similar repositories for topobuilder
Users that are interested in topobuilder are comparing it to the libraries listed below
Sorting:
- A bundle of deep-learning packages for biomolecular structure prediction and design contributed to the Rosetta Commons☆35Updated 2 years ago
- Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations☆59Updated 3 months ago
- Efficient manipulation of protein structures in Python☆54Updated 7 months ago
- GTalign, HPC protein structure alignment, superposition and search (alpha release)☆45Updated 4 months ago
- Source code and examples for AlphaFold Unmasked☆66Updated 2 weeks ago
- ☆49Updated 2 months ago
- ☆67Updated 2 months ago
- ☆43Updated 8 months ago
- ☆40Updated 4 months ago
- Bioinformatics and Cheminformatics protocols for peptide analysis☆41Updated 2 years ago
- Code and data used in https://doi.org/10.1101/2021.08.01.454656☆53Updated 3 years ago
- Machine learning prediction of enzyme optimum pH☆41Updated last month
- Generating and scoring novel enzyme sequences with a variety of models and metrics☆69Updated 4 months ago
- Python package to atom map, correct and suggest enzymatic reactions☆38Updated last year
- ☆35Updated last year
- pyFoldX: python bindings for FoldX.☆46Updated 3 years ago
- Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.☆48Updated 2 weeks ago
- Metrics for our protein design competitions.☆30Updated 7 months ago
- ☆19Updated 2 years ago
- Python package to manage protein structures and their annotations☆43Updated last year
- Kuhlman Lab Installation of AlphaFold3☆26Updated 3 weeks ago
- ☆21Updated 7 months ago
- ☆81Updated 2 months ago
- Active Learning-Assisted Directed Evolution for Protein Engineering☆57Updated 6 months ago
- KA-Search: Rapid and exhaustive sequence identity search of known antibodies☆22Updated 10 months ago
- Deep learning framework for protein sequence design from a backbone scaffold that can leverage the molecular context including non-protei…☆43Updated 6 months ago
- Scores for Hydrophobicity and Charges based on SASAs☆31Updated 2 months ago
- DDGScan: an integrated parallel workflow for the in silico point mutation scan of protein☆47Updated last year
- PyDock Tutorial☆32Updated 6 years ago
- Local Interaction Score (LIS) Calculation from AlphaFold-Multimer (Enhanced Protein-Protein Interaction Discovery via AlphaFold-Multimer)☆54Updated 2 months ago