generatebio / chroma

Related projects ⓘ

Alternatives and complementary repositories for chroma

• sokrypton / ColabDesign
  Making Protein Design accessible to all via Google Colab!
  ☆629Updated this week
• dauparas / ProteinMPNN
  Code for the ProteinMPNN paper
  ☆1,046Updated 3 months ago
• baker-laboratory / RoseTTAFold-All-Atom
  ☆649Updated 3 months ago
• baker-laboratory / rf_diffusion_all_atom
  Public RFDiffusionAA repo
  ☆321Updated 4 months ago
• uw-ipd / RoseTTAFold2NA
  RoseTTAFold2 protein/nucleic acid complex prediction
  ☆333Updated 5 months ago
• steineggerlab / foldseek
  Foldseek enables fast and sensitive comparisons of large structure sets.
  ☆838Updated this week
• HeliXonProtein / OmegaFold
  OmegaFold Release Code
  ☆555Updated last year
• gcorso / DiffDock
  Implementation of DiffDock: Diffusion Steps, Twists, and Turns for Molecular Docking
  ☆1,098Updated 2 months ago
• microsoft / evodiff
  Generation of protein sequences and evolutionary alignments via discrete diffusion models
  ☆525Updated last month
• RosettaCommons / protein_generator
  Joint sequence and structure generation with RoseTTAFold sequence space diffusion
  ☆267Updated 3 weeks ago
• microsoft / foldingdiff
  Diffusion models of protein structure; trigonometry and attention are all you need!
  ☆521Updated 11 months ago
• kyegomez / AlphaFold3
  Implementation of Alpha Fold 3 from the paper: "Accurate structure prediction of biomolecular interactions with AlphaFold3" in PyTorch
  ☆760Updated this week
• Graylab / IgFold
  Fast, accurate antibody structure prediction from deep learning on massive set of natural antibodies
  ☆328Updated last year
• bjing2016 / alphaflow
  AlphaFold Meets Flow Matching for Generating Protein Ensembles
  ☆371Updated last month
• YoshitakaMo / localcolabfold
  ColabFold on your local PC
  ☆611Updated 3 weeks ago
• RosettaCommons / PyRosetta.notebooks
  Jupyter Notebooks for learning the PyRosetta platform for biomolecular structure prediction and design
  ☆493Updated 3 months ago
• gnina / gnina
  A deep learning framework for molecular docking
  ☆633Updated this week
• martinpacesa / BindCraft
  User friendly and accurate binder design pipeline
  ☆302Updated this week
• nrbennet / dl_binder_design
  ☆249Updated 3 months ago
• RosettaCommons / RFDesign
  Protein hallucination and inpainting with RoseTTAFold
  ☆246Updated last year
• LPDI-EPFL / masif
  MaSIF- Molecular surface interaction fingerprints. Geometric deep learning to decipher patterns in molecular surfaces.
  ☆595Updated 5 months ago
• luost26 / diffab
  ✌🏻 Antigen-Specific Antibody Design and Optimization with Diffusion-Based Generative Models for Protein Structures (NeurIPS 2022)
  ☆281Updated last year
• adaptyvbio / ProteinFlow
  Versatile computational pipeline for processing protein structure data for deep learning applications.
  ☆242Updated 9 months ago
• zrqiao / NeuralPLexer
  NeuralPLexer: State-specific protein-ligand complex structure prediction with a multi-scale deep generative model
  ☆267Updated 7 months ago
• lightdock / lightdock
  Protein-protein, protein-peptide and protein-DNA docking framework based on the GSO algorithm
  ☆307Updated 10 months ago
• dptech-corp / Uni-Fold
  An open-source platform for developing protein models beyond AlphaFold.
  ☆379Updated 5 months ago
• MolecularAI / REINVENT4
  AI molecular design tool for de novo design, scaffold hopping, R-group replacement, linker design and molecule optimization.
  ☆367Updated this week
• ccsb-scripps / AutoDock-Vina
  AutoDock Vina
  ☆618Updated 2 weeks ago
• uw-ipd / RoseTTAFold2
  ☆176Updated this week
• pharmai / plip
  Protein-Ligand Interaction Profiler - Analyze and visualize non-covalent protein-ligand interactions in PDB files according to 📝 Adasme …
  ☆465Updated 3 months ago