Alternatives and similar repositories for chroma

Users that are interested in chroma are comparing it to the libraries listed below

• baker-laboratory / RoseTTAFold-All-Atom
  ☆758Updated 5 months ago
• sokrypton / ColabDesign
  Making Protein Design accessible to all via Google Colab!
  ☆829Updated last week
• gcorso / DiffDock
  Implementation of DiffDock: Diffusion Steps, Twists, and Turns for Molecular Docking
  ☆1,352Updated 5 months ago
• microsoft / evodiff
  Generation of protein sequences and evolutionary alignments via discrete diffusion models
  ☆648Updated 5 months ago
• martinpacesa / BindCraft
  User friendly and accurate binder design pipeline
  ☆856Updated 2 months ago
• kyegomez / Open-AF3
  Implementation of Alpha Fold 3 from the paper: "Accurate structure prediction of biomolecular interactions with AlphaFold3" in PyTorch
  ☆798Updated 2 weeks ago
• microsoft / foldingdiff
  Diffusion models of protein structure; trigonometry and attention are all you need!
  ☆556Updated last year
• HeliXonProtein / OmegaFold
  OmegaFold Release Code
  ☆601Updated 2 years ago
• bjing2016 / alphaflow
  AlphaFold Meets Flow Matching for Generating Protein Ensembles
  ☆490Updated last week
• microsoft / bioemu
  Inference code for scalable emulation of protein equilibrium ensembles with generative deep learning
  ☆677Updated this week
• dauparas / ProteinMPNN
  Code for the ProteinMPNN paper
  ☆1,497Updated last year
• steineggerlab / foldseek
  Foldseek enables fast and sensitive comparisons of large structure sets.
  ☆1,083Updated this week
• baker-laboratory / rf_diffusion_all_atom
  Public RFDiffusionAA repo
  ☆447Updated last year
• RosettaCommons / PyRosetta.notebooks
  Jupyter Notebooks for learning the PyRosetta platform for biomolecular structure prediction and design
  ☆623Updated last year
• Graylab / IgFold
  Fast, accurate antibody structure prediction from deep learning on massive set of natural antibodies
  ☆383Updated 2 years ago
• YoshitakaMo / localcolabfold
  ColabFold on your local PC
  ☆770Updated 4 months ago
• uw-ipd / RoseTTAFold2NA
  RoseTTAFold2 protein/nucleic acid complex prediction
  ☆366Updated last year
• dptech-corp / Uni-Fold
  An open-source platform for developing protein models beyond AlphaFold.
  ☆399Updated last year
• nrbennet / dl_binder_design
  ☆360Updated last year
• RosettaCommons / protein_generator
  Joint sequence and structure generation with RoseTTAFold sequence space diffusion
  ☆322Updated last year
• LPDI-EPFL / masif
  MaSIF- Molecular surface interaction fingerprints. Geometric deep learning to decipher patterns in molecular surfaces.
  ☆693Updated last year
• Graylab / DL4Proteins-notebooks
  Colab Notebooks covering deep learning tools for biomolecular structure prediction and design
  ☆444Updated last month
• gnina / gnina
  A deep learning framework for molecular docking
  ☆784Updated 2 months ago
• RosettaCommons / rosetta
  The Rosetta Bio-macromolecule modeling package.
  ☆334Updated this week
• lightdock / lightdock
  Protein-protein, protein-peptide and protein-DNA docking framework based on the GSO algorithm
  ☆360Updated last month
• HannesStark / EquiBind
  EquiBind: geometric deep learning for fast predictions of the 3D structure in which a small molecule binds to a protein
  ☆522Updated 8 months ago
• salesforce / progen
  Official release of the ProGen models
  ☆675Updated 2 years ago
• OATML-Markslab / ProteinGym
  Official repository for the ProteinGym benchmarks
  ☆358Updated 3 months ago
• luost26 / diffab
  ✌🏻 Antigen-Specific Antibody Design and Optimization with Diffusion-Based Generative Models for Protein Structures (NeurIPS 2022)
  ☆347Updated 2 years ago
• MolecularAI / REINVENT4
  AI molecular design tool for de novo design, scaffold hopping, R-group replacement, linker design and molecule optimization.
  ☆589Updated last week