De Novo Protein Design by Equivariantly Diffusing Oriented Residue Clouds
☆191Apr 21, 2024Updated 2 years ago
Alternatives and similar repositories for genie
Users that are interested in genie are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Implementation for SE(3) diffusion model with application to protein backbone generation☆427Jul 3, 2023Updated 3 years ago
- Protein structure diffusion model for unconditional protein generation and motif scaffolding☆195Jun 24, 2024Updated 2 years ago
- Diffusion-based all-atom protein generative model.☆238Aug 27, 2025Updated last year
- ☆64Sep 14, 2023Updated 3 years ago
- Joint sequence and structure generation with RoseTTAFold sequence space diffusion☆334Oct 28, 2024Updated 2 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- FoldFlow: SE(3)-Stochastic Flow Matching for Protein Backbone Generation☆300Dec 10, 2024Updated last year
- Fast protein backbone generation with SE(3) flow matching.☆328Jul 19, 2024Updated 2 years ago
- EigenFold: Generative Protein Structure Prediction with Diffusion Models☆179Apr 6, 2023Updated 3 years ago
- ☆121Dec 7, 2022Updated 3 years ago
- Implementation of Protein Invariant Point Packer (PIPPack)☆37May 28, 2024Updated 2 years ago
- Diffusion models of protein structure; trigonometry and attention are all you need!☆568Sep 9, 2026Updated last month
- Implementation of Chroma, generative models of protein using DDPM and GNNs, in Pytorch☆159Dec 27, 2022Updated 3 years ago
- A generative model for programmable protein design☆835Oct 13, 2026Updated 2 weeks ago
- Implementation of the DDPM + IPA (invariant point attention) for protein generation, as outlined in the paper "Protein Structure and Sequ…☆89Jul 25, 2022Updated 4 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- ☆221Sep 24, 2024Updated 2 years ago
- Compressing protein structures effectively with torsion angles☆199Sep 7, 2026Updated last month
- ✌🏻 Antigen-Specific Antibody Design and Optimization with Diffusion-Based Generative Models for Protein Structures (NeurIPS 2022)☆370Jun 29, 2023Updated 3 years ago
- Making Protein Design accessible to all via Google Colab!☆948Oct 14, 2026Updated 2 weeks ago
- ☆236Mar 2, 2024Updated 2 years ago
- Structure-conditioned masked language modeling for protein sequence design☆75Jan 31, 2024Updated 2 years ago
- Code implementation of "Diffusion probabilistic modeling of protein backbones in 3D for the motif-scaffolding problem" https://arxiv.org/…☆72Aug 11, 2023Updated 3 years ago
- AlphaFold Meets Flow Matching for Generating Protein Ensembles☆547Mar 22, 2026Updated 7 months ago
- The official implementation of the ICLR'23 paper PiFold: Toward effective and efficient protein inverse folding.☆183Jun 17, 2023Updated 3 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Pytorch implementation for ICML 2024 paper Proteus: Exploring Protein Structure Generation for Enhanced Designability and Efficiency.☆90Jun 23, 2024Updated 2 years ago
- Code for the ProteinMPNN paper☆1,895Aug 14, 2024Updated 2 years ago
- Rifdock Library for Conformational Search☆178May 16, 2024Updated 2 years ago
- A collection of *fold* tools☆303Aug 8, 2025Updated last year
- Codebase of the paper "Str2Str: A Score-based Framework for Zero-shot Protein Conformation Sampling" (ICLR 2024)☆90Apr 21, 2026Updated 6 months ago
- ☆103Jul 24, 2026Updated 3 months ago
- Flexible Protein-Protein Docking with a Multi-Track Iterative Transformer.☆102Jul 29, 2024Updated 2 years ago
- Versatile computational pipeline for processing protein structure data for deep learning applications.☆283Feb 14, 2024Updated 2 years ago
- Proteina is a new large-scale flow-based protein backbone generator that utilizes hierarchical fold class labels for conditioning and rel…☆281Jul 24, 2025Updated last year
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Fast protein structure searching or your money back☆119Apr 13, 2026Updated 6 months ago
- Public RFDiffusionAA repo☆492Jul 9, 2024Updated 2 years ago
- Protein Design with Guided Discrete Diffusion☆144Feb 21, 2024Updated 2 years ago
- Generation of protein sequences and evolutionary alignments via discrete diffusion models☆690Jan 15, 2026Updated 9 months ago
- OmegaFold Release Code☆629Dec 12, 2022Updated 3 years ago
- A conditionally adapted protein language model for the generation of enzymes☆24Nov 26, 2024Updated last year
- Implementation of DiffDock-PP: Rigid Protein-Protein Docking with Diffusion Models in PyTorch (ICLR 2023 - MLDD Workshop)☆246Dec 29, 2023Updated 2 years ago