Alternatives and similar repositories for RFDesign

Users that are interested in RFDesign are comparing it to the libraries listed below

• RosettaCommons / protein_generator
  Joint sequence and structure generation with RoseTTAFold sequence space diffusion
  ☆312Updated 7 months ago
• bjornwallner / DockQ
  DockQ is a single continuous quality measure for Protein, Nucleic Acids and Small Molecule Docking Models
  ☆284Updated 4 months ago
• RosettaCommons / RFantibody
  ☆210Updated last month
• nrbennet / dl_binder_design
  ☆313Updated 9 months ago
• zrqiao / NeuralPLexer
  NeuralPLexer: State-specific protein-ligand complex structure prediction with a multi-scale deep generative model
  ☆293Updated last year
• Graylab / IgFold
  Fast, accurate antibody structure prediction from deep learning on massive set of natural antibodies
  ☆359Updated last year
• gjoni / trDesign
  trRosetta for protein design
  ☆179Updated 4 years ago
• dauparas / LigandMPNN
  ☆382Updated 3 months ago
• ikalvet / heme_binder_diffusion
  ☆128Updated 7 months ago
• luost26 / diffab
  ✌🏻 Antigen-Specific Antibody Design and Optimization with Diffusion-Based Generative Models for Protein Structures (NeurIPS 2022)
  ☆322Updated last year
• Kuhlman-Lab / ThermoMPNN
  GNN trained to predict changes in thermodynamic stability for protein point mutants
  ☆171Updated 3 months ago
• baker-laboratory / rf_diffusion_all_atom
  Public RFDiffusionAA repo
  ☆394Updated 10 months ago
• uw-ipd / RoseTTAFold2
  ☆194Updated last month
• rdk / p2rank
  P2Rank: Protein-ligand binding site prediction from protein structure based on machine learning.
  ☆326Updated last month
• ProteinDesignLab / protpardelle
  Diffusion-based all-atom protein generative model.
  ☆198Updated 3 months ago
• patrickbryant1 / Umol
  Protein-ligand structure prediction
  ☆215Updated 10 months ago
• rifdock / rifdock
  Rifdock Library for Conformational Search
  ☆158Updated last year
• RosettaCommons / DeepAb
  Deep learning models and structure realization scripts for the DeepAb antibody structure prediction method.
  ☆159Updated 2 years ago
• guyujun / pyrosetta-basic
  ☆165Updated 3 years ago
• luwei0917 / DynamicBind
  repo for DynamicBind: Predicting ligand-specific protein-ligand complex structure with a deep equivariant generative model
  ☆246Updated last year
• brianhie / efficient-evolution
  Efficient evolution from protein language models
  ☆203Updated last year
• fhalab / MLDE
  A machine-learning package for navigating combinatorial protein fitness landscapes.
  ☆125Updated 3 years ago
• Merck / BioPhi
  BioPhi is an open-source antibody design platform. It features methods for automated antibody humanization (Sapiens), humanness evaluatio…
  ☆188Updated 3 weeks ago
• octavian-ganea / equidock_public
  EquiDock: geometric deep learning for fast rigid 3D protein-protein docking
  ☆240Updated last year
• biolists / folding_tools
  A collection of *fold* tools
  ☆293Updated 8 months ago
• plinder-org / plinder
  Protein Ligand INteraction Dataset and Evaluation Resource
  ☆223Updated last month
• oxpig / ImmuneBuilder
  Predict the structure of immune receptor proteins
  ☆137Updated 4 months ago
• jertubiana / ScanNet
  ☆126Updated last year
• microsoft / protein-sequence-models
  ☆247Updated 10 months ago
• OATML-Markslab / ProteinGym
  Official repository for the ProteinGym benchmarks
  ☆311Updated last month