Alternatives and similar repositories for RFDesign:

Users that are interested in RFDesign are comparing it to the libraries listed below

• RosettaCommons / protein_generator
  Joint sequence and structure generation with RoseTTAFold sequence space diffusion
  ☆310Updated 5 months ago
• gjoni / trDesign
  trRosetta for protein design
  ☆178Updated 3 years ago
• RosettaCommons / RFantibody
  ☆169Updated last week
• nrbennet / dl_binder_design
  ☆302Updated 8 months ago
• Graylab / IgFold
  Fast, accurate antibody structure prediction from deep learning on massive set of natural antibodies
  ☆353Updated last year
• bjornwallner / DockQ
  DockQ is a single continuous quality measure for Protein, Nucleic Acids and Small Molecule Docking Models
  ☆269Updated 2 months ago
• uw-ipd / RoseTTAFold2
  ☆190Updated 4 months ago
• zrqiao / NeuralPLexer
  NeuralPLexer: State-specific protein-ligand complex structure prediction with a multi-scale deep generative model
  ☆288Updated 11 months ago
• luost26 / diffab
  ✌🏻 Antigen-Specific Antibody Design and Optimization with Diffusion-Based Generative Models for Protein Structures (NeurIPS 2022)
  ☆317Updated last year
• Kuhlman-Lab / ThermoMPNN
  GNN trained to predict changes in thermodynamic stability for protein point mutants
  ☆160Updated 2 months ago
• brianhie / efficient-evolution
  Efficient evolution from protein language models
  ☆198Updated last year
• patrickbryant1 / Umol
  Protein-ligand structure prediction
  ☆213Updated 8 months ago
• RosettaCommons / DeepAb
  Deep learning models and structure realization scripts for the DeepAb antibody structure prediction method.
  ☆158Updated 2 years ago
• Merck / BioPhi
  BioPhi is an open-source antibody design platform. It features methods for automated antibody humanization (Sapiens), humanness evaluatio…
  ☆177Updated 7 months ago
• fhalab / MLDE
  A machine-learning package for navigating combinatorial protein fitness landscapes.
  ☆124Updated 3 years ago
• dauparas / LigandMPNN
  ☆350Updated 2 months ago
• OATML-Markslab / ProteinGym
  Official repository for the ProteinGym benchmarks
  ☆292Updated this week
• baker-laboratory / rf_diffusion_all_atom
  Public RFDiffusionAA repo
  ☆388Updated 9 months ago
• ikalvet / heme_binder_diffusion
  ☆119Updated 6 months ago
• ProteinDesignLab / protpardelle
  Diffusion-based all-atom protein generative model.
  ☆189Updated last month
• biolists / folding_tools
  A collection of *fold* tools
  ☆294Updated 6 months ago
• microsoft / protein-sequence-models
  ☆245Updated 8 months ago
• rifdock / rifdock
  Rifdock Library for Conformational Search
  ☆152Updated 11 months ago
• guyujun / pyrosetta-basic
  ☆159Updated 3 years ago
• luwei0917 / DynamicBind
  repo for DynamicBind: Predicting ligand-specific protein-ligand complex structure with a deep equivariant generative model
  ☆236Updated 11 months ago
• rdk / p2rank
  P2Rank: Protein-ligand binding site prediction from protein structure based on machine learning.
  ☆304Updated 3 weeks ago
• oxpig / ImmuneBuilder
  Predict the structure of immune receptor proteins
  ☆133Updated 2 months ago
• uw-ipd / RoseTTAFold2NA
  RoseTTAFold2 protein/nucleic acid complex prediction
  ☆355Updated 10 months ago
• phbradley / alphafold_finetune
  Python code for fine-tuning AlphaFold to perform protein-peptide binding predictions
  ☆148Updated last year
• mat10d / EvolvePro
  This is the offical codebase to reproduce and use EVOLVEpro, a model for in silico directed evolution of protein activities using few-sho…
  ☆235Updated 3 weeks ago