patrickbryant1 / EvoBind
In silico directed evolution of peptide binders with AlphaFold
☆151Updated last month
Alternatives and similar repositories for EvoBind:
Users that are interested in EvoBind are comparing it to the libraries listed below
- ☆114Updated 5 months ago
- Code for ColabDock paper☆137Updated 5 months ago
- Predict multiple protein conformations using sequence clustering and AlphaFold2.☆149Updated 3 weeks ago
- Predict the structure of immune receptor proteins☆132Updated last month
- GNN trained to predict changes in thermodynamic stability for protein point mutants☆152Updated last month
- Protein-ligand structure prediction☆212Updated 7 months ago
- Convenience Python APIs for antibody numbering using ANARCI☆94Updated last month
- ☆104Updated 2 years ago
- Official repo of the modular BioExcel version of HADDOCK☆130Updated this week
- SurfDock is a Surface-Informed Diffusion Generative Model for Reliable and Accurate Protein-ligand Complex Prediction☆154Updated last week
- A bunch of shell utilities for dealing the silent files☆56Updated 2 weeks ago
- Rifdock Library for Conformational Search☆152Updated 10 months ago
- Protein folding in Pymol☆107Updated 2 months ago
- A compilation of deep learning methods for protein design☆97Updated 2 years ago
- Tutorials, cheat sheets, and other resources for computational methods for protein design.☆110Updated last year
- ☆110Updated last week
- AlphaFold-initiated replica exchange protein docking☆72Updated last week
- repo for DynamicBind: Predicting ligand-specific protein-ligand complex structure with a deep equivariant generative model☆228Updated 10 months ago
- Python code for fine-tuning AlphaFold to perform protein-peptide binding predictions☆147Updated last year
- BioPhi is an open-source antibody design platform. It features methods for automated antibody humanization (Sapiens), humanness evaluatio…☆176Updated 6 months ago
- ☆121Updated last year
- ☆74Updated last week
- A machine-learning package for navigating combinatorial protein fitness landscapes.☆123Updated 3 years ago
- MaSIF-neosurf: surface-based protein design for ternary complexes.☆103Updated this week
- DockQ is a single continuous quality measure for Protein, Nucleic Acids and Small Molecule Docking Models☆261Updated 2 months ago
- Masif seed paper repository☆146Updated last year
- Fitness landscapes for antibodies☆66Updated 2 months ago
- Official repository of EnzymeFlow☆82Updated 3 months ago