JCVenterInstitute / FRmatch
Cell type matching in single-cell RNA-sequencing data using FR-Match
☆19Updated 4 months ago
Alternatives and similar repositories for FRmatch:
Users that are interested in FRmatch are comparing it to the libraries listed below
- ☆29Updated last year
- COMET Single-Cell Marker Detection tool☆31Updated 2 years ago
- Individual level Differential Expression Analysis for Single cells☆23Updated 2 years ago
- psupertime is pseudotime ordering for single cell RNA-seq data with sequential labels☆38Updated 2 years ago
- Snakefile-based process to turn 1.4 million ocular cells into a unified meta-atlas☆25Updated last year
- Covarying neighborhood analysis (CNA) is a method for finding structure in- and conducting association analysis with multi-sample single-…☆47Updated last week
- Probabilistic gene expression barcodes for cell type annotation☆25Updated 2 years ago
- Population-scale single-cell RNA-seq profiling across dopaminergic neuron differentiation☆21Updated 7 months ago
- Single-cell Orientation Tracing☆21Updated 3 years ago
- Cluster Identity Predictor (R package implementation)☆19Updated 2 years ago
- A machine learning method for the discovery of the minimum marker gene combinations for cell type identification from single-cell RNA seq…☆59Updated 4 months ago
- Overview of the scripts used to analyse the brainimmuneatlas data☆19Updated 4 years ago
- Flexible, probablistic metrics for quality control of scRNA-seq data☆19Updated 2 years ago
- Data and code for the paper "Developmental diversification of cortical inhibitory interneurons"☆24Updated 6 years ago
- ☆20Updated 3 months ago
- Inferring gene co-expression networks from single cell gene expression data☆24Updated 2 years ago
- Updated scripts and pipelines for processing GESTALT data at single-cell resolution☆19Updated 3 years ago
- ☆28Updated 6 years ago
- Repository for scRNAseq study of human kidneys☆15Updated 5 years ago
- ☆16Updated 5 years ago
- ☆28Updated 2 years ago
- Algorithms for single-cell analysis☆29Updated 3 years ago
- An r package that works as a wrapper to homologene☆42Updated last year
- ☆38Updated 4 years ago
- Hierarchical classification of cells☆23Updated 6 months ago
- post-clustering differential expression test☆35Updated 5 years ago
- Mosaic single cell data integration using non-overlapping features☆36Updated 2 years ago
- Single Cell Epigenome-based Inference of Activity☆19Updated last year
- ☆34Updated 9 months ago
- R implementation of the Reshef and Rumker CNA method (https://github.com/immunogenomics/cna)☆14Updated last year