JCVenterInstitute / FRmatchLinks
Cell type matching in single-cell RNA-sequencing data using FR-Match
☆19Updated last week
Alternatives and similar repositories for FRmatch
Users that are interested in FRmatch are comparing it to the libraries listed below
Sorting:
- Individual level Differential Expression Analysis for Single cells☆26Updated 3 years ago
- Detection of allele-specific subclonal copy number alterations from single-cell transcriptomic data.☆38Updated 2 weeks ago
- Harmony framework for connecting scRNA-seq data from discrete time points☆53Updated 2 months ago
- ☆26Updated 8 months ago
- Repository for scRNAseq study of human kidneys☆15Updated 6 years ago
- Snakefile-based process to turn 1.4 million ocular cells into a unified meta-atlas☆26Updated 2 years ago
- COMET Single-Cell Marker Detection tool☆32Updated 3 years ago
- ☆37Updated 3 weeks ago
- Inference of Minimal Event Distance Aneuploidy Lineage Tree based on single cell copy number profile☆21Updated 2 years ago
- An R package for performing cell typing in SMI and other single cell data☆48Updated 8 months ago
- ☆43Updated 5 years ago
- Finding surprising needles (=genes) in haystacks (=single cell transcriptome data).☆86Updated 2 months ago
- Data and code for the paper "Developmental diversification of cortical inhibitory interneurons"☆24Updated 7 years ago
- Single-cell Case Control Analysis☆52Updated last week
- ☆16Updated 4 years ago
- A machine learning method for the discovery of the minimum marker gene combinations for cell type identification from single-cell RNA seq…☆66Updated 5 months ago
- Algorithms for single-cell analysis☆29Updated 4 years ago
- ☆48Updated 7 years ago
- Population-scale single-cell RNA-seq profiling across dopaminergic neuron differentiation☆22Updated last year
- Analysis methods for analysing single cell RNA-seq data; particularly with the goal of checking if tentative clusters of cells are signif…☆39Updated 2 years ago
- .h5mu files interface for Seurat☆32Updated 2 years ago
- Cell type specific enrichments using finemapped variants and quantitative epigenetic data☆47Updated 2 years ago
- An R-based interface for loom files☆67Updated 5 years ago
- A toolset for analysis and visualisation of Spatial Transcriptomics datasets.☆18Updated 4 years ago
- psupertime is pseudotime ordering for single cell RNA-seq data with sequential labels☆46Updated 3 years ago
- Code accompanying Characterizing genetic intra-tumor heterogeneity across 2,658 human cancer genomes☆44Updated 4 years ago
- Comprehensive pipeline for donor demultiplexing in single cell☆24Updated last week
- An R package designed to demultiplex cell hashing data☆31Updated 3 weeks ago
- Information-based dimensionality reduction☆29Updated last year
- Negative binomial regression for Spatial Transcriptomics data as described in Maaskola et al. 2018☆22Updated 7 years ago