Alternatives and similar repositories for EMT

Users that are interested in EMT are comparing it to the libraries listed below

• CICAMS-Liu-lab / ECGEA
  ☆16Updated 4 years ago
• franklinhuanglab / scRNA-seq-Analysis-of-Prostate-Cancer-Samples
  Code for the manuscript "Single-cell analysis of human primary prostate cancer reveals the heterogeneity of tumor-associated epithelial c…
  ☆22Updated 2 years ago
• zgyaru / anti-PD1_ESCC
  ☆17Updated last year
• miccec / yaGST
  ☆13Updated 7 years ago
• sunnyzwu / stromal_subclasses
  code for data processing and visualisation associated with the stromal subclasses manuscript
  ☆11Updated 4 years ago
• bjstewart1 / kidney_sc_immune
  Repository for scRNAseq study of human kidneys
  ☆15Updated 5 years ago
• AndersonHu85 / ccRCC_multiomics
  ☆16Updated last year
• yunshun / HumanBreast10X
  ☆26Updated 3 years ago
• LuChenLab / inferCC
  Lung cancer 10X analysis
  ☆11Updated 4 years ago
• ludvigla / STUtility_web_site
  ☆14Updated 3 years ago
• Jiaxin-Fan / MuSiC2
  cell type deconvolution for multi-condition bulk RNA-seq data
  ☆26Updated 3 years ago
• molgenis / scRNA-seq
  ☆18Updated last year
• ventolab / Human-Endometrial-Cell-Atlas_HECA
  Human Endometrial Cell Atlas (HECA). An integrated single-cell reference atlas of the human endometrium.
  ☆24Updated 11 months ago
• OSU-BMBL / scread-protocol
  ☆16Updated 2 years ago
• dpeerlab / progressive-plasticity-crc-metastasis
  Notebooks for generating figures in "Progressive Plasticity During Colorectal Cancer Metastasis"
  ☆14Updated 6 months ago
• ZxZhou4150 / Redeconve
  Deconvolution of spatial transcriptomics at single-cell resolution
  ☆17Updated 8 months ago
• cole-trapnell-lab / pseudospace
  ☆12Updated 5 years ago
• parveendabas / GBMatlas
  ☆18Updated 2 years ago
• Famingzhao / NEPAL
  Calculate NEPC risk score from bulk transcriptome data or single-cell RNA-seq for prostate cancer
  ☆14Updated 6 months ago
• bsml320 / scGWAS
  A method which leverages scRNA-seq data to achieve two goals: (1) to infer the cell types in which the disease-associated genes manifest …
  ☆25Updated 2 years ago
• nyuhuyang / scRNAseq-SSCs
  Identified novel mouse spermatogenesis biomarkers based on single-cell RNA sequencing data
  ☆11Updated 2 years ago
• Siliegia / SIGMA
  R package for SIGMA, a clusterability measure for scRNA-seq data
  ☆12Updated 3 years ago
• jbryois / scRNA_disease
  Code for our paper: https://www.biorxiv.org/content/10.1101/528463v1
  ☆18Updated 5 years ago
• pritykinlab / ulipstic-analysis
  ☆9Updated 10 months ago
• olapuentesantana / easier_manuscript
  ☆15Updated 3 years ago
• DongqiangZeng0808 / TMEscore
  Calculating Tumor microenvironment score
  ☆29Updated 2 years ago
• SeadonXing / SSN_scRNA-seq
  The codes and files for the study of subsolid nodules (SSN).
  ☆14Updated 4 years ago
• gxiaolab / scAllele
  ☆34Updated last year
• Waelchli-lab / Single-cell-atlas-of-the-human-brain-vasculature-accross-development-adulthood-and-disease
  Molecular atlas of the human brain vasculature accross development, adulthood and disease at the single-cell level
  ☆13Updated 10 months ago
• Dingpw / Endothelial-Cell-Heterogeneity-and-Microglia-Regulons-Revealed-by-A-Pig-Cell-Landscape-at-Single-cel
  ☆15Updated 2 years ago