GWAS analysis process based on EMMAX software
☆21Dec 12, 2023Updated 2 years ago
Alternatives and similar repositories for emmax-pipeline
Users that are interested in emmax-pipeline are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Construct ab initio gene prediction using only BUSCO augustus models. Add in transcriptome for extra support☆23Sep 13, 2023Updated 2 years ago
- ☆17Nov 26, 2023Updated 2 years ago
- ☆31Apr 16, 2023Updated 3 years ago
- Here, we de novo assembled 110 representative Setaria accessions from a worldwide collected 1,844 variteies, and performed pan-/graph- ge…☆30Sep 13, 2023Updated 2 years ago
- shared scripts in Lu Lab @ Tsinghua University☆14Nov 7, 2018Updated 7 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- a Semi-automated pipeline for assembling T2T genome☆28Oct 16, 2025Updated 9 months ago
- DataColor: Unveiling Biological Data Relationships through Distinctive Color Mapping☆18Nov 23, 2023Updated 2 years ago
- Python Scripts for Bioinformatics☆15Apr 24, 2024Updated 2 years ago
- HiFi-SR is a Python-based pipeline for the detection of plant mitochondrial structural rearrangements based on the mapping of PacBio high…☆11Jun 26, 2026Updated last month
- trackc aims to produce beautiful genome tracks that are highly customizable☆19Jun 6, 2026Updated last month
- Construct and Analyze the North American Vitis pangenome☆29Aug 19, 2025Updated 11 months ago
- https://filippob.github.io/introduction_to_gwas/☆22Jun 8, 2026Updated last month
- MetMiner: A user-friendly pipeline for large-scale plant metabolomics data analysis☆17Nov 7, 2024Updated last year
- Genomic Annotation in Livestock for positional candidate LOci☆14Feb 26, 2021Updated 5 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- ☆11Sep 1, 2022Updated 3 years ago
- A series of scripts to automate sequence workflows☆18Jul 16, 2026Updated last week
- Design gene specific KASP and CAPS/dCAPS primers for any species☆19Sep 19, 2022Updated 3 years ago
- Scripts for Hill et al. (2022) doi:10.1093/molbev/msac085 🟣☆11Apr 28, 2023Updated 3 years ago
- ☆15Feb 22, 2022Updated 4 years ago
- This repository contains all codes and scripts used in the Wild Rice Pangenome Project. The project aims to provide a comprehensive analy…☆30Apr 17, 2025Updated last year
- A graduate-level elective course: Python Programming for Life Science Students☆10Mar 26, 2026Updated 4 months ago
- This is the script used for analysis the population data of alfalfa☆11May 22, 2024Updated 2 years ago
- ☆10Feb 25, 2024Updated 2 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- 基因组组装注释流程及脚本☆15Feb 12, 2023Updated 3 years ago
- ☆25Mar 27, 2026Updated 4 months ago
- Genome haplotype assembly and assessment method☆12Nov 24, 2023Updated 2 years ago
- Repository☆10Oct 23, 2024Updated last year
- Detailed bioinformatics scripts and methods used in the NAM genome paper.☆92Jan 14, 2025Updated last year
- This is something I have decided to do to make something good come out of the current covid situation. Here I will put the publicly avail…☆12Sep 6, 2021Updated 4 years ago
- shiny app for WGCNA...☆31Dec 6, 2024Updated last year
- Guide through code for a Minimmap2 genome alignment and a seq-seq-pan pan-genome alignment with visualizations in R. The tutorial present…☆19May 16, 2025Updated last year
- GEFormer is a genome-wide prediction model for genotype-environment interactions based on a deep learning approach designed to predict ma…☆16Jan 15, 2026Updated 6 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- high-performance BED-to-GTF converter written in Rust☆21Jun 24, 2026Updated last month
- DNNGP: Deep neural network for genomic prediction☆90Jul 30, 2025Updated 11 months ago
- Detailed bioinformatics scripts and methods used in the Maize-Pan-genome paper.☆16Oct 8, 2025Updated 9 months ago
- An RNA-Seq data exploration tool that shows read map coverage of a gene of interest along with a coloured "electronic fluorescent pictog…☆13Jun 18, 2026Updated last month
- ☆17Mar 7, 2025Updated last year
- ☆10Apr 10, 2016Updated 10 years ago
- MODAS: Multi-Omics Data Association Study toolkit☆21Nov 21, 2024Updated last year