bpucker / FlavonoidFriday
Flavonoids are specialized metabolites in plants that have numerous functions including protection against abiotic stresses, pigmentation, and repelling herbivores.This repository provides additional background to the #FlavonoidFriday tweets
☆15Updated 2 months ago
Alternatives and similar repositories for FlavonoidFriday:
Users that are interested in FlavonoidFriday are comparing it to the libraries listed below
- transXpress: a Snakemake pipeline for streamlined de novo transcriptome assembly and annotation☆25Updated 10 months ago
- An R framework for phylostratigraphy☆33Updated 3 weeks ago
- Functional annotation pipeline for proteins from non-model organisms implemented in Nextflow☆17Updated 2 years ago
- An R package designed for drawing gene arrow maps☆36Updated this week
- Explore potential Biosynthetic Gene Clusters in plant genomes. This tool is originally sourced from antiSMASH 4.0.☆25Updated last month
- A Python package for testing evolutionary hypotheses in genome-wide approaches.☆31Updated 3 years ago
- ☆24Updated 7 months ago
- create a interactive coverage plot dashboard from bam files and add gb, vcf and bed tracks☆43Updated 5 months ago
- Improved Inference of Ortholog Groups using Hidden Markov Models☆28Updated 3 weeks ago
- ☆27Updated 4 years ago
- Protein Alignment and Detection Interface☆61Updated 9 months ago
- ☆13Updated last week
- ☆16Updated 7 months ago
- MFannot is a program for the annotation of mitochondrial and plastid genomes☆18Updated last year
- PhyloCSF++ computes PhyloCSF tracks for whole-genome multiple sequence alignments, scores single MSA, annotates CDS features in GFF/GTF f…☆30Updated 2 years ago
- SHOOT.bio - the phylogenetic search engine☆24Updated last year
- Documentation for Evolview☆26Updated 3 years ago
- showTree can visualize the phylogeny, protein sequences and protein domains of a gene family in one figure.☆30Updated 5 years ago
- genEra is a fast and easy-to-use command-line tool that estimates the age of the last common ancestor of protein-coding gene families.☆47Updated last month
- a broadly applicable tool for automated gene identification and retrieval☆30Updated last month
- Assembly by Reduced Complexity (ARC)☆41Updated 8 years ago
- Automatic Assembly For The Fungi☆19Updated 3 weeks ago
- Knowledge-based Identification of Pathway Enzymes (KIPEs) performs an automatic annotation of the flavonoid biosynthesis steps in a new t…☆14Updated 6 months ago
- Generates an NCBI .tbl file of annotations on a genome.☆65Updated 6 years ago
- ☆16Updated 2 months ago
- A comparative genomics workflow using Nextflow, conda, Julia and R☆35Updated 8 months ago
- Quality assessment of de novo transcriptome assemblies from RNA-Seq data☆20Updated 2 months ago
- course about NGS data processing: genomics and transcriptomics☆33Updated 3 years ago
- An R package to infer and analyze synteny networks from protein sequences☆25Updated last month
- DETONATE: DE novo TranscriptOme rNa-seq Assembly with or without the Truth Evaluation☆11Updated 8 years ago