CoBiG2 / RAD_Tools
A collection of usefull tools for RAD or GBS data analysis
☆33Updated 2 months ago
Alternatives and similar repositories for RAD_Tools
Users that are interested in RAD_Tools are comparing it to the libraries listed below
Sorting:
- Tutorial about R package PopGenome☆41Updated 6 years ago
- Automated de novo assembly of whole chloroplast genomes.☆45Updated 7 months ago
- Assessing confidence in introgression among four populations☆27Updated 4 years ago
- Detecting natural selection from population-based genetic data☆27Updated 6 years ago
- Infer demographic history with the Moran model☆47Updated 2 months ago
- Prepare XML input files for divergence-time estimation with SNAPP☆19Updated 2 years ago
- Repository for speciation genomics website☆25Updated 9 months ago
- R functions for generating site frequency spectra (SFS) from a VCF file.☆27Updated 5 years ago
- Quantifying Introgression via Branch Lengths☆52Updated 2 years ago
- Collection of Python scripts for parsing/analyses of RAD-seq data☆22Updated 2 months ago
- ☆26Updated last year
- ☆39Updated last year
- MSMC2 Scripts☆24Updated last year
- Tools and Utilities for msmc and msmc2☆47Updated last year
- Graph-aware Retrieval of Selective Sweeps☆21Updated 8 months ago
- SambaR: Snp datA Management and Basic Analyses in R☆28Updated last week
- Pipelines and tools for the processing of ancient and modern HTS data.☆47Updated last month
- Population genetics analyses from NGS data☆25Updated 4 years ago
- Hybridization detection using phylogenetic invariants☆47Updated 6 months ago
- Tutorial for visualising admixture on a map☆23Updated 4 years ago
- Tutorial on using popular tools for learning about population history☆50Updated 6 years ago
- ☆29Updated 2 years ago
- RADseq workflow using STACKS☆57Updated last week
- A statistical framework for ploidy estimation using NGS short-read data☆57Updated 7 years ago
- Scripts to analyze data using TreeMix. This pipeline runs TreeMix with bootstrapping, helps choose number of migration events and creates…☆34Updated last year
- ☆18Updated 4 years ago
- Population assignment analysis using R☆17Updated last month
- ☆24Updated 7 years ago
- DFOIL: Introgression Testing for Five Taxa☆32Updated 4 years ago
- A package for population structure inference from RAD-seq data☆31Updated 4 years ago