gehara / PipeMasterLinks
An R Package to build and simulate coalescent models
☆20Updated last year
Alternatives and similar repositories for PipeMaster
Users that are interested in PipeMaster are comparing it to the libraries listed below
Sorting:
- Phylogenetic penalized likelihood☆49Updated 2 weeks ago
- Population assignment analysis using R☆17Updated last week
- Modification of BayesAss 3.0.4 to allow handling of large SNP datasets☆16Updated 3 years ago
- Helper scripts for processing and visualization of phylogenetics datasets☆29Updated last year
- ☆26Updated 4 years ago
- BITE: BioInformatics tools for everyone☆21Updated 11 months ago
- Code for computing various support scores for internodes☆19Updated 5 years ago
- ☆18Updated 4 years ago
- method for modeling continuous and discrete population genetic structure☆36Updated last year
- Quartet Sampling method for phylogenetic branch support evaluation☆18Updated last year
- This repository contains the code and manual for the R package delimitR.☆17Updated 3 years ago
- DFOIL: Introgression Testing for Five Taxa☆33Updated 4 years ago
- An R package for predicting ploidal level from sequence data using site-based heterozygosity☆16Updated 5 months ago
- ☆40Updated last year
- ☆19Updated 7 years ago
- Scripts for population genetics analysis☆20Updated 2 years ago
- Fast and simple simulation-based population genetic inference in R☆27Updated last week
- An R function to compute Concordance Factors from SNP datasets☆14Updated 7 months ago
- ☆13Updated 3 months ago
- A package for population structure inference from RAD-seq data☆32Updated 4 years ago
- Detects and blacklists paralog RAD loci analyzed in Stacks or ipyrad, based on the McKinney 2017 method (doi:10.1111/1755-0998.12613)☆10Updated 5 years ago
- ☆13Updated 8 years ago
- A program for multimodel inference on speciation and trait evolution☆33Updated 7 years ago
- UCE Bioinformatics Pipeline☆16Updated 7 months ago
- ☆20Updated 2 years ago
- Performing highly efficient genome scans for local adaptation with R package pcadapt v4☆41Updated 9 months ago
- Two-dimensional outlier detection algorithm for pinpointing errors in small species-specific stretches of the multiple sequence alignment…☆14Updated last year
- Files for the the Physalia course on Population genomic inference from low-coverage whole-genome sequencing data, Oct 10-13, 2022☆60Updated 8 months ago
- A repo for scripts and associated files for the Botany 2020 Virtual Nonmodel Genomics Workshop☆15Updated 4 years ago
- Perl script for manipulating multiple sequence alignments for phylogenetic reconstruction☆11Updated 10 years ago