Alternatives and similar repositories for machuruku

Users that are interested in machuruku are comparing it to the libraries listed below

• wtesto / SpeciesOccurrenceMapping
  Species occurrence dot maps in R
  ☆21Updated 3 years ago
• ivanlfm / BGB_BSM_multiple_trees
  Script to run ancestral range estimation + biogeographic stochastic maps over a sample of phylogenetic trees.
  ☆9Updated 7 months ago
• nmatzke / BioGeoBEARS
  BioGeography with Bayesian (and likelihood) Evolutionary Analysis with R Scripts
  ☆67Updated 3 months ago
• TheWangLab / algatr
  A Landscape Genomic Analysis Toolkit in R
  ☆19Updated 3 weeks ago
• daijiang / rtrees
  rtrees: an R package to assemble phylogenetic trees from mega-trees
  ☆34Updated last month
• cecileane / iBPP
  Bayesian species delimitation integrating genes and traits
  ☆12Updated 3 years ago
• pasraia / RRphylo
  phylogenetic comparative method
  ☆11Updated 2 months ago
• ptitle / epm
  An R package for the calculation of taxonomic, phenotypic and phylogenetic metrics across grid cells.
  ☆13Updated 3 weeks ago
• soltislab / BotanyENMWorkshops
  Using Digitized Collections-Based Data in Research: Applications for Ecology, Phylogenetics, and Biogeography Botany 2025.
  ☆9Updated 2 months ago
• fkeck / phylosignal
  Exploring the Phylogenetic Signal in Continuous Traits
  ☆17Updated 2 weeks ago
• nmatzke / BEASTmasteR
  R code for writing Beast2 XML (especially morphology/tip-dating)
  ☆11Updated last year
• heibl / ips
  R Interfaces to Phylogenetic Software
  ☆12Updated 4 months ago
• bomeara / ComparativeMethodsInR
  A book for teaching people how to do comparative methods in R
  ☆22Updated last year
• mwpennell / geiger-v2
  A suite of methods and models for studying evolutionary radiations
  ☆24Updated 2 years ago
• daijiang / phyr
  Functions for phylogenetic analyses
  ☆32Updated last year
• gbradburd / conStruct
  method for modeling continuous and discrete population genetic structure
  ☆35Updated last year
• jasonleebrown / humboldt
  Welcome to the offical webpage for the R-package ‘humboldt’
  ☆15Updated last year
• gehara / PipeMaster
  An R Package to build and simulate coalescent models
  ☆20Updated last year
• skembel / picante
  R tools for integrating phylogenies and ecology
  ☆35Updated last year
• khabbazian / l1ou
  Detection of evolutionary shifts in Ornstein-Uhlenbeck models
  ☆20Updated 2 years ago
• lamho86 / phylolm
  ☆37Updated 7 months ago
• daijiang / hillR
  An R pakage to calculate diversity through Hill Numbers
  ☆34Updated last year
• ropensci / babette
  babette is an R package to work with BEAST2
  ☆46Updated 2 weeks ago
• thej022214 / corHMM
  Fits a generalized form of the covarion model that allows different transition rate classes on different portions of a phylogeny by treat…
  ☆13Updated 3 weeks ago
• phylocom / phylocom
  Software for the Analysis of Phylogenetic Community Structure and Character Evolution, with Phylomatic
  ☆42Updated 2 years ago
• ropensci / beastier
  R package to run BEAST2
  ☆11Updated last month
• HullUni-bioinformatics / metaBEAT
  Metabarcoding analyses pipeline - metaBarcoding and Environmental DNA Analysis Tool
  ☆19Updated 6 years ago
• AnushaPB / wingen
  Continuous mapping of genetic diversity
  ☆13Updated 2 months ago
• paternogbc / sensiPhy
  R package to perform sensitivity analysis for comparative methods
  ☆14Updated 5 years ago
• grunwaldlab / poppr
  🌶 An R package for genetic analysis of populations with mixed (clonal/sexual) reproduction
  ☆71Updated last week