Alternatives and similar repositories for machuruku

Users that are interested in machuruku are comparing it to the libraries listed below

• daijiang / rtrees
  rtrees: an R package to assemble phylogenetic trees from mega-trees
  ☆36Updated 2 months ago
• wtesto / SpeciesOccurrenceMapping
  Species occurrence dot maps in R
  ☆21Updated 3 years ago
• TheWangLab / algatr
  A Landscape Genomic Analysis Toolkit in R
  ☆20Updated last month
• nmatzke / BioGeoBEARS
  BioGeography with Bayesian (and likelihood) Evolutionary Analysis with R Scripts
  ☆70Updated 7 months ago
• soltislab / BotanyENMWorkshops
  Using Digitized Collections-Based Data in Research: Applications for Ecology, Phylogenetics, and Biogeography Botany 2025.
  ☆14Updated 2 months ago
• pasraia / RRphylo
  phylogenetic comparative method
  ☆11Updated 3 months ago
• fkeck / phylosignal
  Exploring the Phylogenetic Signal in Continuous Traits
  ☆18Updated 4 months ago
• cecileane / iBPP
  Bayesian species delimitation integrating genes and traits
  ☆12Updated 4 years ago
• daijiang / phyr
  Functions for phylogenetic analyses
  ☆36Updated last month
• lamho86 / phylolm
  ☆36Updated 11 months ago
• skembel / picante
  R tools for integrating phylogenies and ecology
  ☆36Updated last year
• mwpennell / geiger-v2
  A suite of methods and models for studying evolutionary radiations
  ☆24Updated 2 years ago
• AnushaPB / wingen
  Continuous mapping of genetic diversity
  ☆15Updated 2 months ago
• hhwagner1 / LandGenCourse
  ☆21Updated last year
• ropensci / babette
  babette is an R package to work with BEAST2
  ☆46Updated this week
• nmatzke / BEASTmasteR
  R code for writing Beast2 XML (especially morphology/tip-dating)
  ☆11Updated last year
• bomeara / ComparativeMethodsInR
  A book for teaching people how to do comparative methods in R
  ☆22Updated 2 years ago
• TGuillerme / mulTree
  Performs MCMCglmm on multiple phylogenetic trees
  ☆12Updated 6 months ago
• phylocom / phylocom
  Software for the Analysis of Phylogenetic Community Structure and Character Evolution, with Phylomatic
  ☆43Updated 2 years ago
• grunwaldlab / poppr
  🌶 An R package for genetic analysis of populations with mixed (clonal/sexual) reproduction
  ☆71Updated last month
• fossilsim / fossilsim
  R package for simulating fossil data on phylogenetic trees under mechanistic models of preservation and sampling
  ☆11Updated this week
• ptitle / epm
  An R package for the calculation of taxonomic, phenotypic and phylogenetic metrics across grid cells.
  ☆14Updated 2 months ago
• daijiang / hillR
  An R pakage to calculate diversity through Hill Numbers
  ☆34Updated last year
• heibl / ips
  R Interfaces to Phylogenetic Software
  ☆12Updated last month
• helixcn / EcoEvoLinks
  Links for Ecology and Evolution
  ☆23Updated 6 years ago
• ropensci / chromer
  package for interacting with the chromosome counts database (CCDB) at https://taux.evolseq.net/CCDB_web/
  ☆12Updated 3 months ago
• thej022214 / corHMM
  Fits a generalized form of the covarion model that allows different transition rate classes on different portions of a phylogeny by treat…
  ☆13Updated last month
• jasonleebrown / humboldt
  Welcome to the offical webpage for the R-package ‘humboldt’
  ☆15Updated 3 weeks ago
• mrborges23 / delta_statistic
  Codes for calculating delta, a phylogenetic analog of the Shannon entropy for measuring the degree of phylogenetic signal between a categ…
  ☆25Updated 4 years ago
• lukejharmon / pcm
  A textbook for phylogenetic comparative methods.
  ☆44Updated 6 years ago