Tom-Jenkins / admixture_pie_chart_map_tutorial

Related projects ⓘ

Alternatives and complementary repositories for admixture_pie_chart_map_tutorial

• mennodejong1986 / SambaR
  SambaR: Snp datA Management and Basic Analyses in R
  ☆26Updated last month
• tonig-evo / workshop-popgenome
  Tutorial about R package PopGenome
  ☆40Updated 5 years ago
• shenglin-liu / vcf2sfs
  R functions for generating site frequency spectra (SFS) from a VCF file.
  ☆27Updated 4 years ago
• mmatschiner / F4
  Assessing confidence in introgression among four populations
  ☆26Updated 3 years ago
• PuttickMacroevolution / MCMCtreeR
  MCMCtreeR: A package to estimate distribution values for temporal node constraints and prepare input files for MCMCtree
  ☆44Updated 5 years ago
• joepickrell / pophistory-tutorial
  Tutorial on using popular tools for learning about population history
  ☆49Updated 6 years ago
• esayyari / DiscoVista
  ☆38Updated last year
• xiaoming-liu / stairway-plot-v2
  The stairway plot is a method for inferring detailed population demographic history using the site frequency spectrum (SFS) from DNA sequ…
  ☆31Updated last year
• carolindahms / TreeMix
  Scripts to analyze data using TreeMix. This pipeline runs TreeMix with bootstrapping, helps choose number of migration events and creates…
  ☆24Updated 8 months ago
• mfoll / BayeScan
  Detecting natural selection from population-based genetic data
  ☆27Updated 5 years ago
• jessicarick / msmc2_scripts
  MSMC2 Scripts
  ☆23Updated 8 months ago
• esrud / GONE
  GONE: Scripts, programs and an example data set
  ☆43Updated 10 months ago
• alachins / sweed
  Likelihood-based Selective Sweep Detection
  ☆36Updated last year
• abacus-gene / paml-tutorial
  paml documentation and tutorials
  ☆47Updated last year
• FerRacimo / GRoSS
  Graph-aware Retrieval of Selective Sweeps
  ☆21Updated 2 months ago
• speciationgenomics / speciationgenomics.github.io
  Repository for speciation genomics website
  ☆24Updated 4 months ago
• PhHermann / LDJump
  R Package to Estimate Variable Recombination Rates using Population Genetic Data
  ☆39Updated 5 years ago
• mfumagalli / ngsPopGen
  Population genetics analyses from NGS data
  ☆25Updated 3 years ago
• clairemerot / physalia_adaptation_course
  ☆18Updated last year
• ForBioPhylogenomics / tutorials
  Tutorials on phylogenomic analyses for the ForBio Phylogenomics course
  ☆30Updated 8 months ago
• pblischak / HyDe
  Hybridization detection using phylogenetic invariants
  ☆42Updated 3 weeks ago
• speciationgenomics / presentations
  Presentations from the course
  ☆36Updated last year
• rtfcoimbra / Coimbra-et-al-2021_CurrBiol
  Code used to analyse WGS data of giraffe in Coimbra et al. 2021
  ☆10Updated last year
• popgenDK / SATC
  Sex assignment through coverage
  ☆17Updated 8 months ago
• alachins / raisd
  RAiSD: software to detect positive selection based on multiple signatures of a selective sweep and SNP vectors
  ☆33Updated last year
• stevemussmann / admixturePipeline
  A pipeline that accepts a VCF file to run through Admixture
  ☆56Updated 2 months ago
• simonhmartin / tutorials
  Tutorials on evolutionary genomics
  ☆41Updated 2 years ago
• Tom-Jenkins / utility_scripts
  Scripts for population genetics analysis
  ☆19Updated 2 years ago
• MikkelSchubert / paleomix
  Pipelines and tools for the processing of ancient and modern HTS data.
  ☆43Updated 3 months ago
• stschiff / msmc-tools
  Tools and Utilities for msmc and msmc2
  ☆46Updated last year